Pseudoalteromonas sp. JSTW: GZH31_03400
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Entry
GZH31_03400 CDS
T10506
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psjs Pseudoalteromonas sp. JSTW
Pathway
psjs03030
DNA replication
psjs03430
Mismatch repair
psjs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psjs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GZH31_03400
03430 Mismatch repair
GZH31_03400
03440 Homologous recombination
GZH31_03400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psjs03032
]
GZH31_03400
03400 DNA repair and recombination proteins [BR:
psjs03400
]
GZH31_03400
Enzymes [BR:
psjs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GZH31_03400
DNA replication proteins [BR:
psjs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GZH31_03400
DNA repair and recombination proteins [BR:
psjs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GZH31_03400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QLJ08918
LinkDB
All DBs
Position
716981..717604
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AA seq
207 aa
AA seq
DB search
MVKRWLSRYVARKQLLAADAYKERYVVIDMELTGLDPRQHEIVSVAWVMIEDQCIKMSGA
QHIINKDVQSLEQSPIYHGIAKQDIDSGESLEAILAKLHQHVDDCILVFHNATLDWGFLK
QACRKLGLEAKARLILDTFVIEKKRLHQQGHEIGHDDLTLSECRKRYGLPHYSSHHALTD
AMATAELFLAQCHQISRGKALKVGELL
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggttaaacgttggctcagtcgttatgtggctcgcaaacaattattggcagctgatgcc
tataaagaacgttacgttgtgatagatatggaactaacggggcttgatccccgccaacat
gaaattgtctcggtggcatgggtgatgatagaagaccagtgcattaaaatgagtggggca
cagcacataattaataaagacgtacagagcctagagcaaagccctatttatcacggcatt
gccaagcaagatatcgatagcggtgaaagccttgaagcaattcttgctaagcttcaccaa
cacgttgatgactgtattttagtttttcataacgcgacgcttgattgggggtttttaaaa
caagcgtgccgtaaactaggcttagaagctaaagcgcggttaattcttgatacgttcgtt
attgaaaaaaagcgtctccatcagcaaggccatgaaataggccacgatgacctaacatta
agcgagtgccgtaaacgctatggcttacctcattacagctctcaccatgctttaaccgat
gccatggccaccgccgagctttttttagcgcagtgtcatcaaatcagtcggggtaaagcc
ttaaaagtgggggagttgctgtaa
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