Pseudoalteromonas sp. JSTW: GZH31_03730
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Entry
GZH31_03730 CDS
T10506
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
psjs Pseudoalteromonas sp. JSTW
Pathway
psjs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psjs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GZH31_03730 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psjs03400
]
GZH31_03730 (xseA)
Enzymes [BR:
psjs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
GZH31_03730 (xseA)
DNA repair and recombination proteins [BR:
psjs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GZH31_03730 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
TIP120
Gly_transporter
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
QLJ08981
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All DBs
Position
complement(796692..798026)
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AA seq
444 aa
AA seq
DB search
MALTHSTQPIYTVSRLNKEIRHVLEQGFSSLVLTGEISNFIAPASGHWYFTLKDDRAQVK
AAMWRGNNRGQTFRPTNGAQVTVRARVSLYEPRGDYQLIVEHMAPAGEGLLKQEFDALKM
RLAAEGLFSSAHKKPLPTTINRVGVITSATGAAIRDILTVLKRRAPQLEVVIYPAMVQGA
DAHSQLIEKINIANQRHEVDVLILGRGGGSLEDLWCFNNEQLARAIFASELPIVSAVGHE
VDTTISDYVADIRAATPSAAAELVSPNTQELHNKVSQLVKHLHHAFKHTLSVKRSTATQF
EHRLQLCHPRNQLNQQTQKLDELTLALHSAINGKIQHYERVLANLTPRLMQRSPEKQLAR
SEHQLVQLHGRLTQAMQQQLSISRNTLSLQASRLDSVSPLSVLARGYSITKNEHGHVVKS
VADIKSGELLITELADGQLKSNVI
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggctttaacgcactcaacacagcctatttatacggtctcgcgcctaaataaggaaatt
cgccatgttttagagcaaggcttttcatcacttgtgttaacgggcgagatttctaatttt
attgccccggcttcaggccattggtatttcactttaaaagacgacagagctcaagtgaaa
gcggctatgtggcgaggcaataaccgtggacagacttttcgcccaacaaatggcgcgcaa
gtcacagtgcgtgctcgggtttcattgtacgaaccgcgcggtgattatcaactcattgtt
gagcatatggcaccggctggtgaagggttactaaaacaagaattcgatgcactgaaaatg
cgccttgccgctgaaggcctttttagttctgcacataaaaagcccctccccactacgata
aaccgcgttggtgtcattacctctgcgactggggctgccatccgcgatattttaaccgtt
ttaaagcgtcgcgcaccgcagcttgaagttgtgatttaccctgccatggtgcaaggggct
gatgcccacagccaacttattgaaaaaattaatattgctaaccagcgacatgaagttgat
gtattaatactcggtcgtggcggtggctcattagaagatctatggtgctttaacaatgaa
caactcgcccgcgctatatttgccagtgaattacctattgtcagcgcagttgggcatgag
gtcgacaccacaatcagtgattatgtagccgatatacgtgccgctacaccttctgccgct
gccgagcttgttagccctaacacgcaggagctacacaataaagtcagtcagttagtgaag
catttacaccatgcatttaaacatacactgtctgttaaacgcagcactgcaacacagttt
gaacatcgtttgcagctgtgtcatccgcgtaaccagttaaaccagcaaactcaaaaatta
gatgagttaaccctcgcattgcacagcgctattaacggtaaaattcagcattatgagcgc
gttcttgcaaacttaacaccgcgtttaatgcagcgttcacctgaaaagcagctggccaga
agcgaacatcaattagtgcaattacatggccgtttaacgcaagctatgcaacaacagctc
tcaatctctcgtaacaccctttcactgcaagcaagccgtttagactcggtgagtccgcta
agcgtgctagcacgtggctacagcatcactaaaaatgagcacggtcacgttgtgaagtca
gtggctgatatcaaatcaggggaattattgataactgaactagcggacggccaattaaaa
tcaaacgtgatctag
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