Pseudoalteromonas sp. JSTW: GZH31_03845
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Entry
GZH31_03845 CDS
T10506
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
psjs Pseudoalteromonas sp. JSTW
Brite
KEGG Orthology (KO) [BR:
psjs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psjs03036
]
GZH31_03845 (xerD)
Chromosome and associated proteins [BR:
psjs03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
GZH31_03845 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
HTH_52
DUF3435
Motif
Other DBs
NCBI-ProteinID:
QLJ09003
LinkDB
All DBs
Position
822491..823426
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AA seq
311 aa
AA seq
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MTIRVAENNFTAEKVAITSNNAEHLELFLDILYLEQGVSENTLMAYRSDLDKFCQFLKDK
DLLAVSSEDIEAYLAYRVDLGLKSRSTARSISALKRFYQYFVREKAIADSPMLNIAQPKA
GQSLPKTLSEAEVEALLAAPNIEEPMGLRDKAMLELLYATGLRVTELVGLRMEQINLRQA
VVFVKGKGNKERLVPLGEEAMYWLERFLKVGRAQMIKHATDFVFPSKRGIGMTRQTFWHR
IKHYAILASVESPLSPHTLRHAFATHLLNHGADLRVVQMMLGHSDLSTTQIYTHVANERL
KSVHEQHHPRA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgacaatacgcgtggctgaaaataatttcacagctgaaaaagtagcaataacgtcaaac
aatgccgaacatttagagctgtttttagatattttgtaccttgagcaaggggtcagtgaa
aacacattgatggcatatcgcagcgatcttgataagttttgtcagtttttaaaagacaaa
gatctactggctgtcagcagtgaagatattgaagcatacttggcataccgagttgattta
gggcttaaatcacgcagcactgcgcgcagcatcagtgcgcttaaacgtttttaccaatac
tttgtacgtgaaaaagccattgctgattcgccaatgctgaatattgcacagccaaaagca
gggcagtcattacccaaaactctgtctgaggctgaggttgaagcactactcgctgcgcct
aatattgaagagcctatggggctgcgcgataaagcgatgttggagcttttatacgcaacg
ggtctgcgcgtcactgagctggtagggcttaggatggagcaaattaacttgcgccaagca
gttgtgttcgtcaaaggtaagggaaataaagagcgtttagtgccgcttggtgaagaagcg
atgtattggcttgagcgctttttaaaagttggccgcgcgcagatgatcaagcatgcaact
gactttgtgttcccatctaagagagggattggcatgacgcgacaaactttttggcatcgt
atcaaacactatgctattttggcatcagttgaatcgccgttatcaccgcatacgcttcga
catgcgtttgcaacgcatttgctgaatcatggggctgatcttcgtgtcgtgcaaatgatg
ttaggtcacagtgacttatcaacaacacagatttatacccatgtagcgaatgagagattg
aagtcggtacacgagcaacatcatccacgtgcttag
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