Pseudoalteromonas sp. JSTW: GZH31_04630
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Entry
GZH31_04630 CDS
T10506
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
psjs Pseudoalteromonas sp. JSTW
Pathway
psjs02020
Two-component system
psjs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psjs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GZH31_04630
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GZH31_04630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psjs03021
]
GZH31_04630
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
psjs02035
]
GZH31_04630
Transcription machinery [BR:
psjs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GZH31_04630
Bacterial motility proteins [BR:
psjs02035
]
Flagellar system
Flagellar assembly proteins
Stator
GZH31_04630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
GerE
UPF0122
UTP15_C
Mg_chelatase_C
Motif
Other DBs
NCBI-ProteinID:
QLJ09852
LinkDB
All DBs
Position
1004296..1005006
Genome browser
AA seq
236 aa
AA seq
DB search
MGYQSAQNLNAIVEKHASLVKKVACHLIARLPASVQLDDLIQSGMIGLIEASKNFDASKG
ASFETFAGIRIRGAMLDEIRRGDWAPRSVHRNARLVAETISDLESILNREPKDTEVAEKL
DITLDEYHHILHDVNSSKVLGIEDLGVDEDVITPMGHDLALDKPFNNVKNERFNQSLLTA
IQSLPERDALVLSLYYNDEMNLKEIGHILDVSESRVSQIHGQAMIKLKAKINDWIN
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgggatatcaatcagcacagaatttaaatgcgattgttgaaaaacatgcctctttagtc
aaaaaagtggcgtgtcatctaattgctcgtttacctgccagtgtgcaactcgatgatttg
attcagtcaggtatgattggccttatagaagcgtcgaaaaattttgatgcgagtaaaggg
gccagttttgaaacatttgcgggtattcgaattcgaggggctatgctcgatgaaatccgt
cgaggtgattgggctccccgttcagttcaccgtaatgcacgccttgtcgctgaaacgatt
tcggatttagagagtattttaaaccgcgagccaaaagacacagaagttgctgaaaaactt
gatattacactggatgagtaccatcatattctacatgatgtaaattccagtaaggtactg
ggtatagaggatttaggcgttgatgaagacgtcatcacacctatggggcatgatttagca
ctagacaaaccgtttaataatgttaaaaatgaacggtttaaccagtctctattgacggct
atccaatcgttaccagaaagagatgcactcgttttgtctttgtattacaacgatgaaatg
aacttaaaagaaatagggcacatactcgatgttagcgaatcgcgtgtgagtcaaatacat
ggtcaggcgatgattaagctcaaagcaaaaatcaatgactggattaattag
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