Pseudoalteromonas sp. JSTW: GZH31_05080
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Entry
GZH31_05080 CDS
T10506
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psjs Pseudoalteromonas sp. JSTW
Brite
KEGG Orthology (KO) [BR:
psjs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psjs03016
]
GZH31_05080 (truB)
Enzymes [BR:
psjs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GZH31_05080 (truB)
Transfer RNA biogenesis [BR:
psjs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GZH31_05080 (truB)
Prokaryotic type
GZH31_05080 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Shigella_OspC
Motif
Other DBs
NCBI-ProteinID:
QLJ09226
LinkDB
All DBs
Position
1098264..1099208
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AA seq
314 aa
AA seq
DB search
MARRSKGRAIDGILLLNKPKGISSNKALQQAKGIYFAQKAGHTGALDPLATGMLPICFGE
ATKFTQFLLDTDKTYVVRAKLGERTTTSDSDGEVVETRPVAVTRAQLEQKIASFLGESDQ
YPSMYSALKYQGQPLYKYAREGIEVPRKCRKINVFSLTLDEFDEANNEVQMTAHVSKGTY
IRTIVDDLGEKLGCGAHVIMLHRSAVGHYPSDKMVTLEQLEEKLQQAKADDVAPSTYLDA
LLLPMDTALVDLPVIEISKEQGMAFSHGQTVVIGKPVPDGVVKVMADGIFIGTGERHKDG
HLKSKRGLSNQLPE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggctagacgcagtaaaggccgtgcaattgacggcattttattacttaacaagccgaaa
ggtatctcgtctaataaagcattgcagcaagcaaagggcatttactttgcacagaaggcc
gggcacaccggcgcgctcgatccgcttgcaacaggcatgctgccgatttgttttggtgaa
gcaactaagtttacccagtttttgttagacacggacaaaacgtatgtcgtacgcgctaaa
cttggggaacgtacaaccacctcagattcggatggcgaagttgttgaaacgcgtccagta
gcggtaactcgtgctcaactcgagcaaaagatcgcaagttttttaggtgagtcggaccaa
tacccatcaatgtactcagcattaaaatatcaaggccagcctttatataaatatgcacgc
gagggcattgaggtaccgcgtaaatgccgaaaaattaatgtgtttagtttaacgcttgat
gagtttgatgaagcaaataacgaagtgcaaatgaccgcccatgtatcgaaagggacgtat
attcgcactattgtggatgaccttggtgaaaagttagggtgtggcgcacacgttattatg
ttgcaccgaagtgctgttggtcattatccgagtgataaaatggtgacgcttgagcaactt
gaagaaaaattgcaacaagctaaagccgatgacgttgcaccgtctacttatttagatgcg
cttttgttacccatggataccgcgttggttgacttacctgtgattgaaattagtaaagaa
caaggtatggcatttagccatggtcaaaccgtggtgattggtaagcccgtgcctgatggt
gtggtgaaagtaatggctgatggtatattcattggcacaggcgagcgtcataaagacggt
cacctaaaatcaaagcgtggtttatcgaatcaactgcctgagtaa
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