Pseudoalteromonas sp. JSTW: GZH31_06155
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Entry
GZH31_06155 CDS
T10506
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
psjs Pseudoalteromonas sp. JSTW
Pathway
psjs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psjs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GZH31_06155 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psjs03400
]
GZH31_06155 (uvrB)
DNA repair and recombination proteins [BR:
psjs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GZH31_06155 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GZH31_06155 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
DUF87
AAA_5
AAA_30
Kinesin
UB2H
AAA
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QLJ09408
LinkDB
All DBs
Position
1321786..1323780
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AA seq
664 aa
AA seq
DB search
MSDHFQLVSKFKPSGDQPTAIAQLSEGLEAGLAHQTLLGATGTGKTFTMANIIHDLNRPT
IIMAHNKTLAAQLYGEMKEFFPHNAVEYFVSYYDYYQPEAYVVASDTFIEKDASINEHIE
QMRLSATKALLERRDTIIVASVSAIYGLGDPDSYMKMMLLLKVGETVDQRDMLRRLAELQ
YTRNDIEFSRGTYRVRGEVVDIFPAESDTYAVRVEMFDDEIERLSIFDPLTGAVEKHIVR
ATIYPKTHYVTPREKILDAIENIKVELKDRRAQLLSANKLVEEQRIAQRTQYDIEMMTEL
GYCSGIENYSRYLSGRTPGDPPPTLLDYLPDDALMIIDESHVTVSQIGAMYKGDRSRKEN
LVEYGFRLPSALDNRPLRFEEFEAIAPQTIYVSATPGEFELTRSAGEVAEQVIRPTGLVD
PEIEVRPVGTQVDDLLSEIYKRVEVNERVLVTTLTKRMAEDLTDYLNDHDVKVRYLHSDI
DTVERVEIIRDLRAGVFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTRSLLQTIG
RAARHLNGKAILYGDRITNSMRQAIDETDRRREKQQAHNAEHGIVPQALVKSITDIMDVG
EEAGPKDNLRLVRKESKKVLSAKEIASQIKALETKMHAYASDLEFEKAASVRDEIHELQQ
QLIN
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcattttcaactggtttcaaaatttaaaccaagtggtgaccaacccacggcc
attgctcaattatctgagggccttgaagcagggcttgctcatcaaacattgttaggtgct
acagggacgggtaaaacctttaccatggcaaatataatccatgatctaaatcggccaacg
attatcatggcgcataataagacgcttgcagcgcagttatatggagagatgaaagagttt
ttccctcataatgcggttgaatatttcgtgtcatattatgattactatcagcctgaagcg
tatgttgttgccagtgacacatttatagaaaaagatgcctctattaacgagcatattgag
caaatgcgcttaagtgcaaccaaagcgttacttgaacgccgtgacacaattattgttgca
tctgtttcggctatttacggtttgggcgatcctgactcgtacatgaagatgatgttgtta
ctcaaagtaggcgaaactgtcgaccagcgtgatatgcttcgtcgcttagccgagttgcaa
tatacgcgtaatgacattgaatttagtcgtggtacgtaccgtgtgcgcggtgaagtggtt
gatattttccctgctgagtcagatacatacgcggtgcgtgtggaaatgtttgatgatgaa
attgagcgtttaagtatctttgatccattaacaggggctgttgaaaagcacattgtgcgc
gcgactatttacccaaaaacacactatgtgacaccccgtgagaaaattcttgatgcgatt
gaaaatattaaggtcgagttaaaagatcgcagagcccagttgcttagcgcaaataaactt
gtcgaagagcaacgtattgcacagcgaacacaatacgatatagaaatgatgaccgagctt
ggttattgctctggaattgagaactacagccgttatttatcggggcgtactccgggcgat
ccgccgcctacattgcttgactatttacctgatgatgccttgatgatcatcgatgagtcg
catgtgaccgtatcgcaaattggtgcaatgtacaaaggtgaccgtagtcgaaaagagaac
ttagttgaatatggatttcgtcttccttcggcattggataatcggccacttcgatttgaa
gagttcgaagcaattgcaccgcaaacgatttatgtatcggcaacgccaggcgaatttgag
ctaacgcgctcagcaggtgaagtggctgaacaagttattcgtcctacaggcttagtagac
cctgaaattgaagtgcgccctgtgggtactcaggttgatgacttattgtctgagatttac
aaacgagttgaggtaaatgagcgtgtcttagtgacaaccttaacaaaacgtatggcagaa
gacttaacggattacttaaatgatcatgatgtaaaagttcgttatttgcattctgacatc
gatactgttgagcgagttgagattattcgtgatttgcgcgctggtgttttcgatgtgtta
gtgggtattaacttattacgagaaggccttgatatgccagaggtttcactcgtagcgata
ctcgatgctgataaagaaggctttttacgttcgacgcgttctttattacaaacaataggg
cgcgctgctcgtcatttaaatggtaaagcaattctgtacggtgatcgtataacgaattca
atgcgtcaggctattgatgaaactgatcgtcgtcgtgaaaaacagcaagctcataacgca
gaacatggcattgtaccgcaagcgttagtgaaaagtatcacggatattatggatgttggt
gaagaggctggccctaaagataaccttcgattggtccgtaaagaatctaaaaaagtgcta
agcgctaaagagattgccagtcaaattaaagcactggagactaaaatgcacgcgtacgca
agtgatctggagtttgagaaagcagcctcagtgcgtgacgaaatacatgaattacaacaa
cagctaataaattaa
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