Pseudoalteromonas sp. JSTW: GZH31_06465
Help
Entry
GZH31_06465 CDS
T10506
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
psjs Pseudoalteromonas sp. JSTW
Pathway
psjs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psjs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GZH31_06465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psjs03019
]
GZH31_06465
Enzymes [BR:
psjs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GZH31_06465
Messenger RNA biogenesis [BR:
psjs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GZH31_06465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_25
CMS1
Motif
Other DBs
NCBI-ProteinID:
QLJ09461
LinkDB
All DBs
Position
1397511..1398917
Genome browser
AA seq
468 aa
AA seq
DB search
MSFDGLGLSQSLVNAVLEKGYETPTPIQTQAIPAIIAGRDVMAAAQTGTGKTAGFTLPLI
ERLAKGKKASGNRVRALVLAPTRELALQVSENVEEYAKHSNISSFVVYGGVKINPQMMRL
RKGVDILVATPGRLLDLHNQNALQFDTLEVLVLDEADRMLDMGFIHDIKRIIAKLPTQRQ
NLMFSATFSDEIRALAKGLINDPVEISVAAKNTTAKSVSQSVYAVDKSRKTALLSHLIRT
NNWQQVLVFSRTKHGANRLVKQLERDDIVGAAIHGNKSQGARVKALEGFKNGEVRVLVAT
DIVARGLDIVELPHVINYDLPNVYEDYVHRIGRTGRAGASGHAISFVTAEDAIDLYGIER
FIGELIPRATEAGFEPSNPVPERELDARPIKPKKPKKAKQPFSKPKSDSKKPNSNGSGIG
PRRGGSGKKSNATKGSDEQTQSPWAKRQSVGGNAQRKRRPKNGGSNNS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgatggcttaggattatcacagtctttagttaatgcagttttagaaaaaggc
tatgaaacacctacgcctattcaaacacaagcgatccctgcgattatagcgggtagagac
gtgatggccgcggcgcaaaccggtacaggcaaaacagcaggttttactttaccgttaatc
gagcgtttagccaaaggcaaaaaggcaagtggaaatcgcgtgcgcgcgcttgtgcttgca
cctacacgtgagcttgcattacaagtgagcgaaaacgtagaagaatatgctaagcattct
aatattagttcgtttgtggtgtatggtggcgttaaaattaacccgcaaatgatgcgcctt
cgtaaaggtgttgatattttagttgcaacaccgggacgcttactggatttacataatcag
aatgcgctccagtttgataccttagaagtgttagtgcttgatgaagccgaccgtatgctt
gatatgggctttattcacgatattaaacgtatcattgcgaagttacctacgcagcgtcaa
aatttgatgttttcagcgacgttctctgatgaaatacgtgccttagcaaagggacttatt
aacgacccagtcgagatttctgtagcagctaaaaacaccaccgcaaaatctgtgtcacaa
tcggtttacgcggttgataagtcaagaaaaacagccctattgagccatttgattcgtacc
aacaattggcaacaggtattagtttttagccgtaccaaacacggtgctaaccgtttggtt
aaacagttagagcgtgatgacattgtgggcgcggctattcatggtaataaatcgcaaggt
gcgcgtgttaaagcgcttgaaggttttaaaaatggcgaagtacgcgtattagttgccaca
gatatcgtagcccgagggcttgatattgttgagctgccgcacgttatcaattacgacttg
ccgaatgtgtacgaagattatgtacaccgaattggtcgaactggtcgtgcaggtgcttct
gggcatgctatttcgtttgtgacagccgaggatgccattgatctatacggtattgaacgt
tttattggtgaattgatcccgcgcgcgactgaagcagggtttgaaccaagcaatcccgtg
cctgaaagagagcttgatgcacgcccaattaaacctaaaaagccgaaaaaagccaaacag
ccgttttctaagccgaagtcggatagtaaaaaaccaaatagcaatggcagtggcataggt
ccacgccgtggtggttcgggaaaaaaatctaatgccactaaaggaagtgacgagcaaaca
caaagcccatgggctaagcgtcagtctgtaggggggaatgctcaacgcaaacgtcgccct
aaaaacggtggctcaaataacagctaa
DBGET
integrated database retrieval system
