Pseudoalteromonas sp. JSTW: GZH31_09060
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Entry
GZH31_09060 CDS
T10506
Name
(GenBank) DNA polymerase III subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
psjs Pseudoalteromonas sp. JSTW
Pathway
psjs03030
DNA replication
psjs03430
Mismatch repair
psjs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psjs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GZH31_09060
03430 Mismatch repair
GZH31_09060
03440 Homologous recombination
GZH31_09060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psjs03032
]
GZH31_09060
03400 DNA repair and recombination proteins [BR:
psjs03400
]
GZH31_09060
Enzymes [BR:
psjs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GZH31_09060
DNA replication proteins [BR:
psjs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GZH31_09060
DNA repair and recombination proteins [BR:
psjs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GZH31_09060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
AAA_5
DUF1040
Motif
Other DBs
NCBI-ProteinID:
QLJ06978
LinkDB
All DBs
Position
complement(1977067..1977960)
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AA seq
297 aa
AA seq
DB search
MPLPWLEPLQQQLAQSYSQHRFHHAQLFNGDKGVGKQRLVEQLADGLLCASANNLVACGH
CKSCLLNQAGTHPDKRVVKVDGQTIGVDEIRDITDFINHSAAQNGNKVVVLEQCHKMTTA
AANALLKTLEEPSLHRYLLLTCEQIAQLPATILSRCAVHEVKVNIETTTQWLASLDIPNY
SWLGLFSQQPLLVEQWQNEQQLESIDTLYKFATEIKDSHNFSALVDILNKDTSLVNVFTL
FLTEHLKTQLVLGMDFFSYQKAQSAISEFIYNSSHVLGLNMPLAISQLAFSLRESHN
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgccattgccttggcttgaacccttacaacagcagttagcacagagctactctcagcat
cgttttcaccatgcgcaattgtttaatggtgataaaggggttggcaagcagcgcttagta
gagcagttagctgatggtttgttatgtgcctcagccaataatttggttgcctgtggtcat
tgtaaaagttgtttgttaaatcaagcaggcacgcatcccgataaacgggtggttaaagta
gacgggcaaacgatcggtgttgatgaaattcgtgatattaccgattttataaaccattca
gctgctcaaaacggtaataaggtggttgtacttgagcagtgccataaaatgaccacagcc
gctgccaatgcgctattaaaaacgcttgaagagccaagtttacaccgctacctattatta
acctgtgaacaaatcgcgcaattacctgcgaccatactcagtcgttgtgctgtgcacgaa
gtgaaagttaatatagaaactacgacacaatggttagcctccctagatattcctaattat
tcttggttaggtttgttttcgcaacaaccactccttgtagaacaatggcaaaatgaacag
caattagagtctattgatacactctataaatttgcaactgagataaaagacagccataat
ttcagtgcgttagtcgacatactgaataaagatacaagtttggttaatgtctttactttg
tttttaactgagcatctaaaaacgcaattagtattgggaatggattttttcagctatcaa
aaagcgcaatctgcaatttctgagtttatttataacagctcacatgtgcttggtttgaat
atgccgctggccatttcgcaactagcgttttctttacgtgaaagccataattag
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