Pseudoalteromonas sp. JSTW: GZH31_10175
Help
Entry
GZH31_10175 CDS
T10506
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
psjs Pseudoalteromonas sp. JSTW
Brite
KEGG Orthology (KO) [BR:
psjs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psjs01011
]
GZH31_10175
Enzymes [BR:
psjs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GZH31_10175
Peptidoglycan biosynthesis and degradation proteins [BR:
psjs01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GZH31_10175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM3_NFP
NMB0315_dom_I
LysM_RLK
LysM_OapA
LysM2_CERK1_LYK3_4_5
DUF6884
DUF3071
SLAM
Motif
Other DBs
NCBI-ProteinID:
QLJ07173
LinkDB
All DBs
Position
2226750..2228333
Genome browser
AA seq
527 aa
AA seq
DB search
MYKSPLVLTLALVLSGCQLTATDTAGSDNDNRVEQQLAGASPSDINDALMLNAQYQQLAD
TDEPPPVFDDVWERIRYQLSIDVPQNRPVVAERNYYARHQAYLDRIAKRAEPYLYFIVEE
VEKREMPIEIALLPIVESAFDPFGYSHRSASGIWQFMPQTGERFDLKQNWWYDGRRDIVQ
STRAALDYLSYLHKTLEGDWLNAIAAYNSGEGRLLRAIKKNRKKHLPTDFWSLDLPKETT
SYVPKLLALSDLVKRSDEFGIKWQPIINAQVIDVVNVGSQIDLALAADMAGISLTELYRL
NPGFNRWATDPNGPHFLLLPSDKIDTFSEKLAKTEQKDRLRWQQYVVARGDSLSVIAKKF
STSAGAIKTLNKLSSNTIRVGQQLLVPLSDGEINSQHLPDSVRMAANKATRKKLSHKVAS
GDTLWDISREYDVTIAELAKWNNLKKNAVLRVGQTLTVYKDEKTQLAATQTTERTITYKV
RRGDSLARIAAKFNVSVDDIIKWNSLAGQKYIQPGQKLKLRVDVRSA
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtataagtctcctttagttttaacgcttgcgctggttttgagtggctgtcaattaaca
gcaactgacactgctgggtcagataatgacaaccgtgttgagcaacagcttgcaggcgca
agccccagtgacatcaatgatgcattgatgctcaacgcacagtatcagcaattagctgat
actgatgagccccccccagtatttgatgatgtgtgggagcgtattcgctaccagctatct
attgatgtaccgcaaaatcgccctgttgtcgccgagcgtaactactatgcacgccatcaa
gcatacctagatcgtatcgccaaacgtgccgagccttatctttactttattgttgaagaa
gtcgaaaaacgtgaaatgcctatcgaaattgcactgctgccaattgttgagagtgcattt
gatccctttggttattcacatcgcagtgcatctggcatatggcaatttatgccacaaaca
ggcgagcgtttcgatttaaaacaaaactggtggtatgacggtcgtcgcgacatcgtgcaa
tctacgcgggctgctttggattacttatcctatttgcacaagaccttagaaggtgactgg
ttaaatgcaattgcagcctataattcaggtgaaggtcgcttactaagagcaattaaaaag
aaccgtaagaaacatttaccgaccgatttctggtcgttagatttgcccaaagaaaccacc
tcttacgtaccaaagcttctcgcactttctgatcttgttaaacgtagcgatgaatttggc
attaagtggcaaccgattattaatgcacaagttatcgatgtcgttaacgtaggaagtcaa
attgatttagccctcgctgcagatatggcaggtattagcttaacggagttataccgtttg
aaccccggttttaaccgctgggcaaccgatccgaatgggccgcatttcttattattacca
tcagataaaatagacaccttctctgagaaattggcaaaaacagagcaaaaagatcgttta
cgctggcaacagtatgttgtggcgcgcggcgatagcttatcggttattgcgaaaaagttt
tcaaccagtgcgggagcgattaaaacactcaataaattgtcatcaaacacaatacgtgtt
gggcaacaattattagtgcctttaagtgatggcgaaattaacagccaacacctgccagac
tctgttcgcatggctgcaaataaagcaacgcgaaaaaaactgagccataaagtagccagt
ggtgacacgttgtgggacataagccgcgaatacgatgtcacaattgctgaacttgctaag
tggaataatcttaagaaaaatgcagtgttacgtgttggtcaaacactaacggtgtataaa
gatgaaaaaacacagcttgcagcgactcaaacgaccgagcgcaccattacctataaagtt
cgccgtggcgattcattagcacgtatcgctgctaagtttaatgtctctgtggatgatatt
ataaagtggaactcgttggctgggcaaaaatacattcaaccaggccaaaagttaaaatta
agggtcgatgttcgcagcgcctaa
DBGET
integrated database retrieval system
