Pseudoalteromonas sp. JSTW: GZH31_10410
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Entry
GZH31_10410 CDS
T10506
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
psjs Pseudoalteromonas sp. JSTW
Pathway
psjs03030
DNA replication
psjs03430
Mismatch repair
psjs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psjs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GZH31_10410 (holA)
03430 Mismatch repair
GZH31_10410 (holA)
03440 Homologous recombination
GZH31_10410 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psjs03032
]
GZH31_10410 (holA)
03400 DNA repair and recombination proteins [BR:
psjs03400
]
GZH31_10410 (holA)
Enzymes [BR:
psjs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GZH31_10410 (holA)
DNA replication proteins [BR:
psjs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GZH31_10410 (holA)
DNA repair and recombination proteins [BR:
psjs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GZH31_10410 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
HP_1247_M
SNAPC2
Motif
Other DBs
NCBI-ProteinID:
QLJ07208
LinkDB
All DBs
Position
2269454..2270494
Genome browser
AA seq
346 aa
AA seq
DB search
MRCYANQLTSQLKKGLAPFYMVFGEEPYQIAECVSQIRQAAKQHGFDEVIKFTLMQGFDW
QEIIAQYQSMSLFSARTLIEFDLNEQKPGTTGSQIFKQLTELVNDDTILVLKGAKASQDI
QRSAWFKALDKQGIFVPCYPLTGNHLTRWLDEQCYRLNLNLHNNAKQSLIEATEGNLLAC
HQELEKLSLLYGSDLVDQQAVMQGLLNQSKFDIFDLSDALLKGHAEQAVKVMTKLAADNT
EAMSIFWAINKEASNLLAMQHARLTGANMTDLYKQFNIWKNQQATIQHALNRLNSKVLEQ
IIKQLAQFDAAYKQGNLIAPYQALTHICLVFCQPLSIPLPCHPHSD
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgttatgcgaatcaactcaccagccaactaaaaaaaggcctcgcccctttctac
atggtgtttggtgaggagccctaccaaatagcggaatgcgtatcacagatacgtcaagca
gctaaacagcacggttttgacgaagtcatcaaattcacattgatgcagggctttgattgg
caagagattattgctcaatatcaaagtatgtcactgttcagtgcacgcaccctgattgaa
tttgatttaaacgagcaaaaaccgggcaccacgggcagtcaaatatttaaacagcttact
gagctggtcaatgatgacactattttagtgttaaaaggcgccaaagccagccaagatatc
cagcgtagcgcttggtttaaagcactcgataaacaaggcatctttgtgccttgttatccg
ctaacaggcaatcacctaacccgctggttagatgagcaatgttatcgtttaaatttaaac
ctgcataacaatgctaagcaaagcctcatagaagcaactgaaggcaacctgcttgcgtgt
catcaagagcttgaaaagctctcactgctttatggcagtgacttagttgaccaacaagcc
gtgatgcaagggctgctcaatcaatcaaagtttgatattttcgatttgagcgatgcatta
ctcaaaggtcacgctgagcaagcagtcaaagtcatgaccaaactcgctgcggataatacc
gaagccatgagtattttttgggctattaataaagaagccagcaacctacttgctatgcag
catgccagactaacgggcgccaatatgactgacttatacaagcagtttaatatttggaag
aatcaacaagcgacaatccaacacgcgctgaatcgtttaaacagcaaagtacttgagcaa
ataattaaacaactcgctcaatttgatgccgcttacaaacaaggtaacttaattgcccct
tatcaagcgttgactcatatttgtttagtgttttgtcagccgttatcaatccccttacct
tgtcatccacattctgactga
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