KEGG   Pseudoalteromonas sp. JSTW: GZH31_13705
Entry
GZH31_13705       CDS       T10506                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification system endonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
psjs  Pseudoalteromonas sp. JSTW
Brite
KEGG Orthology (KO) [BR:psjs00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:psjs02048]
    GZH31_13705 (hsdR)
Enzymes [BR:psjs01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     GZH31_13705 (hsdR)
Prokaryotic defense system [BR:psjs02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   GZH31_13705 (hsdR)
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD DUF4145 Helicase_C HSDR_N AAA_19 zf_Hakai FXMRP1_C_core UvrD-helicase
Other DBs
NCBI-ProteinID: QLJ07813
LinkDB
Position
complement(3036290..3039706)
AA seq 1138 aa
MGSDFSNFDFLKHHDELLLRLAQTAERCFAPDPNTTLVKMRQLGEALAQNVAARVGVDFG
QDVKQVDLLRELDYTLKLDERIKDAFHVIRKLGNTANHDFTSSSHRDALKSMQLGHALSV
WYHKLYGGKAAKGFVFTPFVKPQDPSIEVRELEEKLHELEVERQRSSERLKIAEQLKQIE
AEKAAAERKRSEQMLTDSQTWEQIATEQEALLAEYRDKMVKANIMYMAQFNAKDKQAQQQ
EIQRVEKSAFQLNESETRVLIDEQLAEAGWLVDSLNLKYSKGTRPVVNENRAIAEWPTKS
GPADYILFMGLTPVAVVEAKKSAKNVYGAIDQAKRYARDLEPNPSFELDAIWGDFKVPLT
FATNGRPYLKQLEQESGIWFLDVRDNAHRRKALKGWYSPHEIKGYLKQTTQQAEQKLDAM
DFDYDLKLRDYQVDAIEAVEQTIKEGKDRALVAMATGTGKTKTCIALVYRLLKAERFRRV
LFLVDRSALGEQAATDFKEVRMEQLQTFADTFELMELGNKKPDNGTKVHVATVQGLVKRI
LYPSDNDTKPGVGQYDCIVVDECHRGYLLDRELSDTELLFRDQKDYQSKYRSVIDYFDAF
KIGLTATPALHTVDIFGEPVFSYSYTEAVLDGHLNDHLPPVRINTKLSEMGIHYKINEEV
KVYDAENSDIKTFNTPDELDFEVAEFNRKVIAPNFTKTVTKWLIESDSIDPYSEAKTLVF
CVTDKHADEVVEAFKQACEDYHGEVEDDAIQKITGATDKPLDKIRSFKNDRLPNIAVTVD
LLTTGVDVPKICNLVFLRRVNSRILFEQMLGRATRLCPEISKGPFKIYDAVDIYKQLEKV
NSMKPVVTNVDITFSELEQEMAHSESEDLKALAKNQFIAKLQVKRRHLTPEQSDKFETIT
GQSPQQFIKDLKAQPAEQVAKWFTEHPGLGEILDSKVQAAAGGTKPVYISDHQDEFTNIT
TGYGDGQKPDDYLRAFNDFVNANSNRLLAIKTVVQAPWELTRQNLKELALVLEQNHFREQ
DLQVAWSEVKNEDIAARIIGFIRQAAIGEALIPFEQRVDNALAKILASQSWKTPQIQWLN
TIAKQMKATTIVDEAALDQGIFKHQGGIKRANKLFEQPIAEVLHMFNQTLWQTTNQSA
NT seq 3417 nt   +upstreamnt  +downstreamnt
atgggaagcgattttagtaactttgattttttaaaacaccatgacgaattactacttcgt
ttagctcaaacggctgaacgttgttttgcaccagatccaaatacaaccctagttaaaatg
cgccagttaggtgaagccttggctcaaaatgtcgctgcgcgagttggtgttgattttggt
caagatgttaagcaagtggatttattaagagagcttgattacaccctaaagctcgatgaa
cgaattaaagatgccttccatgttattcgcaaattaggtaacaccgctaaccacgatttt
acctcaagtagccaccgagatgctttaaagtctatgcagttaggccacgctttatctgtg
tggtatcacaagctgtatggcggcaaagcagcaaaggggtttgtatttactccattcgtt
aaacctcaagatccatctatagaagttagagagcttgaagagaagctacatgaacttgaa
gttgaacgtcaaaggtcatctgaacgtctaaaaattgcagagcagttaaagcaaatcgaa
gctgaaaaagccgctgccgagcgaaagcgttctgagcaaatgcttacagatagccaaacg
tgggaacaaatagccactgagcaagaagcattgctagctgagtatagagataaaatggtt
aaagccaatatcatgtatatggctcagtttaatgctaaagataaacaagcacagcagcaa
gaaatccagcgagttgaaaagtcagcgtttcagctaaatgaaagtgaaacgcgtgtactt
attgatgagcagttagctgaggctggttggctggtggatagcttaaacctaaagtattca
aaaggcacaaggccagttgtaaacgagaatagggccattgcagagtggccaactaaatca
gggcctgcggattatattttatttatgggccttacacctgttgctgttgtagaggctaaa
aagtcagctaaaaatgtttacggtgcaatcgaccaagcaaaacgctatgccagagactta
gaacctaacccatcattcgagttagatgctatatggggcgattttaaagtgcctctcaca
tttgcgactaatgggcgaccttatttaaagcaattagagcaagaaagcggtatttggttt
ttagatgtgcgagataacgctcatagacgtaaagcacttaaaggctggtattcaccacac
gaaataaaaggctatttaaagcaaaccacccagcaagcagaacaaaagcttgatgcgatg
gactttgattacgatcttaaattaagagactatcaagttgatgccattgaagcagtagag
caaacaattaaagaaggaaaagaccgcgcgttggttgctatggcaacaggtactggtaaa
acaaaaacatgtattgccctagtttatagattgcttaaagcagagcgctttcgccgcgtg
ttatttttagttgaccgctcagcattaggcgaacaagctgcaactgactttaaagaagtg
agaatggagcaactccaaacatttgccgataccttcgagcttatggagctgggtaataaa
aagccagataacggaaccaaagtgcatgtggcaacggtgcaaggtttagttaagcgtatt
ttatacccgagcgataacgataccaagcccggcgtaggtcagtacgattgtatagtagtg
gatgaatgccaccgtggttacctgcttgatagagagctcagcgatacagagttattattt
agagaccaaaaagactaccaatctaaatatcgctcagtcattgattactttgatgcattt
aaaataggccttacagcaacgcctgcgctacatacagtagacatatttggtgaacccgta
tttagttatagctatacagaggcagtacttgacgggcatttgaatgatcatttaccgcct
gtacgtatcaataccaaactttctgagatgggtattcattataaaattaatgaagaagtt
aaagtgtatgatgctgaaaatagtgatataaaaacatttaacacccctgatgaactcgat
tttgaagtagcagaatttaaccgtaaagtaatagccccaaatttcactaaaacagtcaca
aaatggcttatcgaaagcgattctatcgacccatactcagaggctaaaacattagtattt
tgtgtaacagataaacacgcagacgaagtggtcgaagcttttaaacaggcatgtgaagat
taccacggtgaagttgaagacgatgccattcaaaaaattacaggcgctacagataagccg
cttgataaaatccgctcgtttaaaaacgatcgcctacctaatatagccgtaacggtagac
ttattaaccacaggtgtagatgtgccaaaaatatgtaatttggtattcttacgccgtgta
aatagccgtattttatttgaacaaatgcttggccgcgctacacgtttatgccccgaaata
agtaaaggcccgtttaaaatttatgatgcggtagatatctacaagcagttagaaaaagta
aacagcatgaagcctgttgtcactaatgtagatattacctttagtgaactagagcaagaa
atggcacacagcgaaagtgaagatttaaaagcattagccaaaaatcagtttatcgctaaa
ttacaagttaagcgccgccacttaacacctgaacaaagtgataaatttgaaaccataaca
gggcaatcaccacagcaattcatcaaagacttaaaagcgcagcctgctgagcaagtagct
aaatggtttaccgagcaccccggtttaggtgaaattcttgatagtaaagttcaagctgca
gctggtggcactaaacctgtgtatatatctgatcaccaagatgagtttaccaacattact
acgggctatggtgatgggcaaaagcccgatgattatttacgcgcctttaacgactttgta
aatgccaatagcaaccgtttgctcgctattaaaacagttgtgcaagcaccatgggaatta
actcgccaaaatctaaaagaactcgctttagtgcttgaacaaaaccactttagagaacaa
gatctacaagtggcgtggagcgaagttaaaaacgaagatattgccgcacgtattatcggg
tttattaggcaagcggctataggcgaagcacttattccgtttgaacaacgtgttgataac
gcactagctaaaatattagccagccaaagttggaaaacaccacaaatacaatggttaaat
actatagccaaacaaatgaaggccaccaccattgtagatgaagccgcgctcgaccaaggt
atttttaaacaccaaggcggtataaagcgcgctaataaattatttgaacaacccattgct
gaagtactgcacatgtttaatcaaacactgtggcaaaccacgaatcaatcagcctag

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