Pseudoalteromonas sp. JSTW: GZH31_16205
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Entry
GZH31_16205 CDS
T10506
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
psjs Pseudoalteromonas sp. JSTW
Brite
KEGG Orthology (KO) [BR:
psjs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psjs01011
]
GZH31_16205
Enzymes [BR:
psjs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GZH31_16205
Peptidoglycan biosynthesis and degradation proteins [BR:
psjs01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GZH31_16205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_RLK
NMB0315_dom_I
Motif
Other DBs
NCBI-ProteinID:
QLJ08280
LinkDB
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Position
3608377..3609651
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AA seq
424 aa
AA seq
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MFLNRFLGLVVCLIVTGCQTAPESLTEKKPIIKANPDTVVTESKTEQVDAVPPLKPSELE
DVWQRIRVQLQFSDSSHPDVQKRIAWYLTHPNYMEEISRRAAPYLYHIVTAVENRDLPIE
LALMPLIESDFDASAYSHKHASGLWQLTPSIAKYFKVKITPWYDGRQDVIDSTRAALDFI
EYLYKRFDGDWYHAIAAYNIGEGRVLQAIARNQKQGKPTDFFNLKLPSQTRQYVPKLLAA
AQLLKHQKMVFPSIKNEEAISILPVSGAVILADKAKWQELEELNHGVIRYPAVIDAPHIV
VPKDQQSTFKTLLANQKSNDYSQWQHYTVKRGDSLSVIAKRYKVTVSQLKTFNSLKTNTI
RVGQKLILPQLADQQIEYKVRSGDSLWKIAKQYKVSITKLKQWNNLSRDSLRVGEKLTVF
ISNS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gtgtttttaaatcgatttttaggccttgttgtttgtcttattgtaacaggctgtcagact
gcccctgagtctcttactgaaaagaagcccataattaaggcaaatccagatactgtggtt
acagaatctaaaacagaacaagtagatgcggtgccaccgctaaaaccaagtgaacttgaa
gatgtgtggcagcgtattcgcgttcaactgcagtttagcgattcaagtcatcctgatgta
caaaagcgcattgcttggtaccttactcatccgaattatatggaagaaataagccgccgt
gcagcgccgtatttgtatcatatcgtcacagcagtagaaaaccgtgacttacccatagaa
cttgccctaatgccgcttatagagagcgattttgatgccagtgcctattcgcacaagcat
gcatcgggtttatggcaacttactccttcaatcgccaaatactttaaagtaaaaattact
ccttggtatgatggtcgccaagatgtgattgacagcacacgtgcagctctcgattttata
gagtatctttataaacgctttgatggcgattggtatcatgctattgctgcctacaatatc
ggtgaggggcgagtgttacaagccattgctcgtaatcaaaagcaaggtaaaccaaccgat
tttttcaacttaaaactaccatcacaaactcgtcaatatgtgcccaagctgctcgctgct
gcacagttgcttaaacatcaaaaaatggtctttccgtcgattaaaaatgaagaagcaatt
agcatcttgcctgtgtcaggggctgtgatcttagctgacaaagcaaaatggcaagaactc
gaagagttaaaccatggcgtaattcgctaccctgcagtaatagatgcgccacatattgtg
gtaccaaaagatcaacagtcaacttttaaaacactgttagcaaatcagaaaagtaatgat
tacagccagtggcaacattacaccgtaaaacgcggcgatagcttaagcgtaatagcaaaa
cgttataaagtgacagtcagccagcttaaaacctttaatagcttaaaaacgaacactatt
cgcgtaggtcaaaaacttatattaccgcaattagctgatcaacaaattgaatacaaagta
agatctggcgacagcttatggaaaatagcaaagcaatacaaagtcagcataacaaaacta
aagcaatggaataacctttctagagatagtctaagagtaggcgaaaagctcaccgtattt
atctcaaatagttaa
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