Pseudomonas sp. JY-Q: AA098_00100
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Entry
AA098_00100 CDS
T09824
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psjy
Pseudomonas sp. JY-Q
Pathway
psjy00061
Fatty acid biosynthesis
psjy00071
Fatty acid degradation
psjy01100
Metabolic pathways
psjy01212
Fatty acid metabolism
psjy02024
Quorum sensing
psjy04146
Peroxisome
Module
psjy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psjy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AA098_00100
00071 Fatty acid degradation
AA098_00100
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AA098_00100
09145 Cellular community - prokaryotes
02024 Quorum sensing
AA098_00100
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psjy01004
]
AA098_00100
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psjy04147
]
AA098_00100
Enzymes [BR:
psjy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AA098_00100
Lipid biosynthesis proteins [BR:
psjy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AA098_00100
Exosome [BR:
psjy04147
]
Exosomal proteins
Exosomal proteins of breast milk
AA098_00100
Exosomal proteins of breast cancer cells
AA098_00100
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF599
Motif
Other DBs
NCBI-ProteinID:
ANI31980
LinkDB
All DBs
Position
22511..24217
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AA seq
568 aa
AA seq
DB search
MTDNFWKDKYPVGVAAEINPDQYPNIQAVLKESCQRFADKPAFSNLGRTITYAELYELSD
TFAVYLQQYTDLQPGDRIAVQMPNVLQYPVVVFGALRAGLVVVNTNPLYTPREMEHQFND
SGAKALVCLANMAYLAEQVLPKTGIETVIVTEIGDLLSPFKRVLVNTMVKHVKRMVPAYK
LPHAIPFTTAMVQGRGKTAKAVNPSSADIAILQYTGGTTGVAKGAMLTHRNLIANMLQAK
ALMGSEMREGVEVLIAPLPLYHIYAFTFHCMAMMLMGGHNVLITNPRDLPAMTKDLAKHP
FTGFVGLNTLFVALCNNEAFRQLDFSNLKATFSGGMALQVATAERWTQVTGCSICEGFGM
TETSPLASVNPFSNIQIGTIGIPVPSTQCKVIDEAGKDLPLGARGELCVKGPQVMKGYWQ
RQEATDEILDKDGWLKTGDIAVIQADGFMRIVDRKKDMILVSGFNVYPNELEDVLATLPG
VLQCAAIGIPDEKSGEAIKLLVVVKPGSELSTEQVMEHMRANVTGYKVPKAVEFRETLPT
TNVGKILRRELRDEALRKHAASADKVQA
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataatttttggaaggacaagtatcccgttggggttgctgctgaaataaaccct
gaccagtatccgaatatccaggcggtactgaaagagtcctgccaacgttttgccgacaaa
ccagctttcagcaacttgggtagaaccatcacctatgcggagctgtacgagttgtcggac
acctttgctgtctatttgcagcagtacaccgacttgcaacctggtgatcgtatcgccgtg
caaatgcccaatgtgctgcagtatccggtggtggtctttggtgccttgcgtgctggccta
gtggtggtgaacaccaatccgttatacacccctcgggaaatggaacatcaatttaacgac
tccggtgccaaggccttggtttgccttgccaacatggcctacttggccgaacaagtgcta
cctaaaaccggcatcgaaaccgttatcgtcaccgaaatcggtgacctgctttcgccattc
aagcgtgtgctggtaaacaccatggtcaaacatgtgaagaggatggtgccggcctataag
ctgccgcacgccattccgttcactacagcgatggtacaagggcggggaaaaacggctaaa
gcggtcaatccgagcagcgctgatattgccatattgcaatacaccggcggcaccacgggc
gtagctaagggagcgatgctgactcaccgcaacctgatcgccaacatgctgcaggccaag
gcgttgatgggttcggaaatgcgtgagggcgtcgaagtgctgattgcgccattgccgctg
taccacatctatgcgttcacctttcactgcatggcaatgatgctgatgggtgggcataac
gtgttgattactaatccgcgtgatttgccagcgatgaccaaagatctggccaagcacccg
ttcactggttttgtcggcctcaacactttgtttgtcgccctgtgcaacaacgaggcgttt
cgtcagttggatttctccaacttaaaagccacgttctcgggcggtatggcattgcaagtc
gccacggccgagcgttggacgcaggtcaccggttgttcgatttgcgaaggctttggcatg
accgaaaccagtccactcgcttcggtaaatccgtttagtaacatccagattggcactata
ggcatcccggtgccttcgactcagtgcaaagtaatcgacgaagccggcaaagacctgcca
cttggggcgcgcggcgagctgtgtgttaagggaccacaggtgatgaagggctattggcaa
cgtcaggaagccaccgacgaaatcctcgacaaggatgggtggttgaagactggtgatatc
gcggtaattcaggccgacggcttcatgcgcatcgtcgatcgtaagaaggacatgattctg
gtgtctggcttcaatgtttaccctaacgaactggaggacgtgctggccaccttaccaggc
gtattgcagtgtgccgctatcggtattccggacgagaaatccggtgaagcgatcaagctg
ctggtggtggttaaaccgggcagtgagctgagtacagagcaggttatggagcacatgcgc
gctaacgtcaccggctacaaggtacctaaggcggtggagttccgtgaaaccttaccgacc
accaacgtcggaaagattttgcgccgtgaactgcgtgacgaagcgctgcgcaaacacgct
gcatcggcggataaggtccaagcctga
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