Pseudomonas sp. JY-Q: AA098_00230
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Entry
AA098_00230 CDS
T09824
Name
(GenBank) transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
psjy
Pseudomonas sp. JY-Q
Brite
KEGG Orthology (KO) [BR:
psjy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psjy03000
]
AA098_00230
Transcription factors [BR:
psjy03000
]
Prokaryotic type
Helix-turn-helix
Other families
AA098_00230
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
Mce4_CUP1
Motif
Other DBs
NCBI-ProteinID:
ANI32003
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Position
53419..54285
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AA seq
288 aa
AA seq
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MNLLQHIAQSRHLLRKSELKVADHVLLDPAAVMHSSMADLAHSVGISEPTIVRFCRAIGC
SGFQDLKLKLAQSLAAGASFGQFAIHEDDSVADYSLKIFDTTLHTLMEVREHLDPQALQQ
AVSAMAQAQRVEFYGFGASGAVAADAQHKFFRLLLSAAAYSDPHMQAMSAVTLKPGDVAV
CISQSGRSKDLLITANLVRESGANLITLCPSQTPLAELSTVNLAIDVHEDTEIYTPLTSR
IAHLVVIDVLAMGVAMARGPSLVNHLKSVKRSLRSLRLSPKSIKATDD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgaatctgttgcaacatatcgcccaatcgcgccacctgctgcgcaaatcggaactgaaa
gtggccgaccacgtgctgctcgacccggctgccgtcatgcacagctccatggccgatttg
gcgcacagcgtgggtatcagtgagccgaccatcgtgcgtttctgccgggccattggctgc
tcgggcttccaggacctgaagctgaagctggcgcaaagcctggctgccggggccagcttc
ggtcagttcgccatccacgaagacgattcggtcgccgactacagtctgaagatcttcgac
accaccctgcacaccctgatggaagtgcgcgagcaccttgatccgcaggcactgcaacaa
gccgtgagcgccatggcccaggcgcaacgggtagagttttatggctttggcgcttccggt
gccgttgcggccgatgcccagcacaagttcttccgcctgctgctcagcgcggcagcgtat
tccgacccccacatgcaagcgatgtcggcggttaccctgaaaccgggtgatgtggcggtg
tgtatttcccaatcgggccgttccaaggacctgctgatcactgccaacctggtccgtgag
agcggcgccaacctgattaccctgtgccccagccagacgccgctggccgagctatcgacg
gtcaacctggcgatcgacgtgcatgaagacaccgagatctacaccccactgacctcgcgt
attgcccacctggtggtgatcgacgtgctggccatgggcgttgccatggcgcgcgggcct
agcctggtcaaccacctgaagagcgtgaaacgcagcctgcgcagcttgcgtctgtcgccc
aagtcgatcaaggctaccgacgactga
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