Pseudomonas sp. JY-Q: AA098_00835
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Entry
AA098_00835 CDS
T09824
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
psjy
Pseudomonas sp. JY-Q
Pathway
psjy00300
Lysine biosynthesis
psjy00470
D-Amino acid metabolism
psjy01100
Metabolic pathways
psjy01110
Biosynthesis of secondary metabolites
psjy01120
Microbial metabolism in diverse environments
psjy01230
Biosynthesis of amino acids
Module
psjy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psjy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AA098_00835
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AA098_00835
Enzymes [BR:
psjy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AA098_00835
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ANI32120
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Position
complement(185934..187181)
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AA seq
415 aa
AA seq
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MNAFNYRDGELFAEGVALSAIAERYGTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVH
CFNVESTDELERLQVVAAEMGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA
IYVRAAQLPNLEVVGVDCHIGSQLTTVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGV
GVRYRDEQPPQVADYIKAIRERVGERDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKDF
AIIDAAMNDLIRPALYQAWMGVSAVKPRAGEGRAYDLVGPICETGDFLGKDRVLNLAEGD
LLAVESAGAYGFVMSSNYNTRGRCAEILVDGDQAFEVRRRETVAELYAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctttcaactaccgcgacggtgagctgttcgcggaaggcgtggccctgtcggcc
attgctgaacgttacggcacccccacctatgtgtactcgcgcgcccacatcgaggcccag
taccgtagctacgcagacgccctgcaaggcaccgagcacctggtgtgcttcgcggtcaag
gccaactccaaccttggcgtgctgaacgtgctggcgcgcctgggcgcaggctttgacatt
gtttccggtggtgaactggagcgtgtactggccgctggcgggcgtgccgaccgcgtggtg
ttctccggcgttggcaaaacccgtgaagacatgcgccgtgccctggaagttggcgtgcac
tgcttcaacgtcgaatccaccgacgagctggagcgcctgcaagtagtcgccgccgaaatg
ggcaaggttgccccggtgtcgctgcgggtcaacccggacgtcgatgccggtactcacccg
tacatctccaccggccttaaagaaaacaagttcggcatcgccattgccgatgccgaggcc
atctacgtacgcgccgcacagctaccgaacctggaagtggtcggtgtcgactgtcacatc
ggctcgcaactgaccaccgtcgagccattcctcgacgccctcgaccgcctgctggtgctg
gtcgaccgcctggccgagtgcggcatacacctgcgccacctggacctgggtggcggtgtc
ggcgtgcgctaccgcgacgaacagccaccacaggtggccgactacatcaaggccatccgc
gaacgcgtgggcgagcgcgacctggccctggtgttcgagcctggccgctacatcgtcgcc
aacgctggcgtgctgctgacccgcgtggaatacctcaagcacaccgaacacaaggacttc
gcgatcatcgatgcagcgatgaacgacctgatccgcccggccctgtaccaggcctggatg
ggtgtcagcgcggtcaagccacgtgcaggcgaaggccgtgcctatgacctggtcggccct
atctgcgagactggcgacttcctcggcaaggaccgcgtactcaacctggccgaaggtgac
ctgctggccgtagagtccgcgggcgcctatggttttgtcatgagctccaactacaacacc
cgcggccgttgcgctgaaatcctggtcgacggcgaccaggcgttcgaagtacgccgccgc
gagaccgtcgccgaactgtatgctggcgaaagcctgctgccggagtaa
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