Pseudomonas sp. JY-Q: AA098_02235
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Entry
AA098_02235 CDS
T09824
Name
(GenBank) RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
psjy
Pseudomonas sp. JY-Q
Brite
KEGG Orthology (KO) [BR:
psjy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psjy03009
]
AA098_02235
Enzymes [BR:
psjy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AA098_02235
Ribosome biogenesis [BR:
psjy03009
]
Prokaryotic type
rRNA helicases
AA098_02235
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
P-loop_SecA
CMS1
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
ANI32386
LinkDB
All DBs
Position
complement(508862..510247)
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AA seq
461 aa
AA seq
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MTTESTAFATLPLSTAMLANLEALGYASMTPIQAQSLPVILKGQDLIAQAKTGSGKTAAF
GIGLLNPINPRYFGCQALVLCPTRELADQVAKELRRLARAEDNIKILTLCGGVSLGPQIA
SLEHGAHIIVGTPGRIQQHLDKGTLVLDGLNTLVLDEADRMLDMGFFDAIASIIGKTPSR
RQTLLFSATYPAGIKQLAADFMRNPQQVKVESLHTDNQIEQRFIEIDPQQRLEAVTRVLG
HYRPQSCVAFCFTKQQCEDVVAHLTAKGIVAQALHGDLEQRDRDQVLTMFANRSSSVLVA
TDVAARGLDIDGLDMVINVELARDAEIHVHRVGRTGRAGEKGVAVSLVAPAEGHRAQAIE
ALQKSPLRWDQLDSLKNKGGEPLLPVMTTLCIAAGRKDKLRPGDILGALTGDAGIPGKQV
GKIAIFDFQAFVAVERALAKQAMQRLNSGKIKGRALKVRII
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccgaatccaccgcctttgccaccttgccgctgtccactgccatgctggccaac
ctggaggcccttggctatgcctcgatgacgccgatccaggcccagagcctgcctgtcatc
ctcaaaggccaggacctgatcgcccaggccaagaccggtagcggcaagactgccgccttc
ggcatcggcctgctcaacccgatcaacccgcgctacttcggctgccaggcgttggtgctc
tgccctacccgcgaactcgccgaccaggtggccaaggagctgcgccgcctggcccgtgcc
gaggacaacatcaagatcctgaccctgtgcggcggcgtttcgctgggcccacagatcgct
tcgctggagcacggtgcgcacatcatcgtcggcaccccagggcgcatccagcagcatctg
gacaaaggcaccctggtcctggacgggttgaacaccctggtgctggacgaagccgaccgc
atgctcgacatgggcttcttcgacgccatcgccagtatcatcggcaagaccccgtcgcgc
cgccagaccctgctgttctcggccacctacccggccggcatcaagcaactggccgccgac
ttcatgcgcaacccgcagcaggtcaaggtcgaaagcctgcacaccgacaaccagatcgag
cagcgtttcatcgagattgacccgcagcaacgcctggaagccgtcacccgcgtgctcggc
cactaccgcccgcagtcgtgcgtagcgttctgcttcaccaagcagcaatgcgaagacgtg
gttgcccacctgaccgccaagggcatcgtcgcccaggccctgcacggcgacctggagcag
cgcgaccgtgaccaggtgctgaccatgttcgccaaccgcagcagctcggtgctggtggct
accgacgtggccgcgcgcggcctggacatcgatggcctggacatggtcatcaacgtggag
ctggcgcgtgatgcggaaatccacgtgcaccgcgtgggccgtaccggccgcgccggcgag
aaaggcgttgcggtcagcctggtggcaccggccgaaggccaccgcgcccaggccatcgaa
gcgctgcagaagagcccgctgcgctgggaccagttggacagcctgaaaaacaagggcggc
gagcccctgctgccggtgatgaccacactgtgcattgccgctggccgcaaggacaagctg
cgccctggcgacattctgggggccctgaccggtgatgccggcatcccgggcaagcaagtg
ggcaagatcgccatcttcgacttccaggcgtttgtggccgtggagcgggcgttggccaag
caagccatgcagcgactgaacagcggcaagatcaagggtcgcgccctgaaagtccgcatt
atctaa
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