Pseudomonas sp. JY-Q: AA098_04450
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Entry
AA098_04450 CDS
T09824
Name
(GenBank) penicillin-binding protein
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
psjy
Pseudomonas sp. JY-Q
Pathway
psjy00550
Peptidoglycan biosynthesis
psjy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psjy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AA098_04450
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
psjy01003
]
AA098_04450
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psjy01011
]
AA098_04450
Enzymes [BR:
psjy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
AA098_04450
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AA098_04450
Glycosyltransferases [BR:
psjy01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
AA098_04450
Peptidoglycan biosynthesis and degradation proteins [BR:
psjy01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
AA098_04450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
PBP_1A_C
PBP1_TM
Motif
Other DBs
NCBI-ProteinID:
ANI32776
LinkDB
All DBs
Position
1007672..1009993
Genome browser
AA seq
773 aa
AA seq
DB search
MTRTRNPRTPQKRPTGRSRAWLGWALKLSLVGLVIVAGFAVYLDAVVQEKFSGKRWTIPA
KVYARPLELFTGQKLSKNDFLTELDALGYRRENAANGPGAASVSGNTVDLNTRGFQFYEG
MEPAQFVRVRFSGDYVAGLSGANGKALDVVRLEPLMIGGIYPKNLEDRILIKIDQVPKYL
LETLVATEDREFYSHYGVSPKSIARAMWVNTSSGSMRQGGSTLTQQLVKNFYLSSERSLS
RKLTEAMMAVLLELHYDKREILEAYLNEVFVGQDGQRAVHGFGLASQFFFSQPLSELKLH
QIALLVGMVKGPSYYNPRRHPERALARRNLVLDLVAEQGVASQAEVDAAKKMPLGVTKRG
SLADSSFPAFLDLVKRQLRQDYRDEDLTEEGLRIFTSFDPILQMKAETSMSETFKRLAGR
KGADDVEAAMVVTNPETGEVQALIGSRQAGFAGFNRAIDAVRPIGSLVKPSVYLTALEQP
SKYTLTSWVQDEPFSVKGADGQVWRPQNYDRRPHGTIYLYQGLANSYNLSTAKLGLEVGV
PNVIKTIGRLGVNVDWPAFPAMLLGAGGMSPMQVATMYQTIANGGFNTPMRGIRSVLTAE
GEPLKRYPFQIQQTFDPGAIYLVQNAMQRVMREGTGRSVYNTLPRSLTLAGKTGTSNDSR
DSWFSGFSQDLLAVVWMGRDDNGKTPFTGATGALQVWTSFMKKADPLPLDMPQPDNVVQA
WIDPYTGHGSDASCPGAVQMPYIRGSEPPAGATCGGEQDPVESVMDWVKGWMN
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaacccgaaatccccgcacccctcagaaacgcccgaccggccgctcccgcgcc
tggctgggctgggctttgaagctcagcctggttggcctggtgatcgtcgccggcttcgcg
gtttacctcgatgccgtcgtccaggaaaagttctccggcaagcgctggaccatcccggcc
aaagtgtatgcccgaccgctggagctgttcaccggccagaagttgagcaagaacgacttc
ctcaccgagctcgatgcgctcggctaccgtcgcgaaaacgcggccaacggcccgggcgct
gcgtccgtcagcggcaataccgtcgacctcaatacccgtggctttcagttctacgagggc
atggagccggcgcagttcgtccgtgtacgcttctctggcgattacgttgcaggcctttcc
ggtgccaatggcaaggcgcttgacgtggtgcggctggagccgctgatgatcggcggcatc
tatccgaaaaatctcgaagaccgcatcctgatcaagatcgatcaggtacccaaatatctg
ctcgaaaccttggtggccacggaagaccgcgagttttacagccactacggcgtgtcgcca
aagtccatcgcccgggccatgtgggtcaacacgtcgtccggctcgatgcgccagggtggc
agtaccctgacccagcagttggtgaagaacttctacctcagcagcgagcgcagcctcagc
cgcaagctgaccgaggcgatgatggcggtcctgctcgaactgcactacgacaagcgcgaa
atccttgaggcttacctcaacgaggtgttcgtcggccaggacggtcaacgcgcggtgcac
ggctttggtctggcgagccagttcttcttcagccagccgctgtctgagctgaaactgcat
cagatcgccctgctggtgggcatggtcaaaggcccgtcctactacaacccgcggcgtcac
cccgagcgtgccctggctcgccgcaacctggtgctcgacctggtggccgagcagggcgtg
gccagccaggcagaagtcgatgcggcgaagaaaatgccgctgggcgtgaccaagcgtggc
agcctggccgacagctcgttccctgccttcctcgacctggtcaagcgacagttgcgccag
gactaccgcgacgaagacttgaccgaagaaggcctgcgcatctttaccagcttcgaccct
atcctgcagatgaaggccgaaacatcgatgagcgagaccttcaagcgcctggcgggccgc
aagggggcagacgatgtcgaggcggcaatggtcgtgaccaaccctgaaaccggtgaagta
caggcgctgatcggtagccgccaggcaggttttgccggcttcaaccgggccatcgatgct
gtacggccgatcggctccctggtcaaaccgtcggtatacctgactgcgctggagcagccg
agcaagtacaccctgaccagttgggtgcaggacgagccattttcggtcaaaggggctgac
ggccaggtctggcgcccgcaaaactatgaccgccgcccgcatggcactatctacctgtac
caggggctggccaactcttacaacctgtcgaccgccaagctcggcctggaagtgggtgtg
ccgaacgtgatcaagaccattggtcgtttgggcgtgaatgtcgactggccagcgtttccg
gccatgttgctgggggcgggtggcatgtcgccgatgcaggtcgcaaccatgtaccagacc
atcgccaacggcggcttcaacacgccgatgcgcggtatccgcagcgtgctcaccgccgag
ggcgagccgctcaagcgctacccgttccagatccagcaaaccttcgacccgggtgccatt
tacctggtgcagaacgccatgcagcgtgtaatgcgcgaaggtacagggcgttcggtgtac
aacaccttgccacgctcgctgactctggcgggcaagaccggtaccagtaacgactcgcgt
gacagctggttctccggcttcagtcaggatctgctggccgtggtgtggatgggccgtgac
gataacggcaagacaccgtttaccggcgccaccggcgccttgcaggtgtggaccagcttc
atgaagaaagccgacccgctgccgctggatatgccgcaaccggataacgtggtgcaggcc
tggatcgacccttacacaggccacgggtctgatgccagctgtccgggagcggtgcagatg
ccgtatattcgcgggagtgagccgccggccggcgcaacctgtggcggcgagcaggaccca
gtcgaatcggtaatggactgggtcaagggctggatgaattaa
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