Pseudomonas sp. JY-Q: AA098_05645
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Entry
AA098_05645 CDS
T09824
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psjy
Pseudomonas sp. JY-Q
Pathway
psjy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psjy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AA098_05645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psjy03400
]
AA098_05645
Enzymes [BR:
psjy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AA098_05645
DNA repair and recombination proteins [BR:
psjy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AA098_05645
Prokaryotic type
AA098_05645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ANI32996
LinkDB
All DBs
Position
1274406..1275098
Genome browser
AA seq
230 aa
AA seq
DB search
MTDDDRIKLEPSWKAALRGEFDQPYMHQLREFLRGEYAAGKEIYPPGPLIFNALNSTPLD
QVKVVILGQDPYHGPGQAHGLCFSVQPGVATPPSLVNIYKELQRDLNIPIPSHGYLQSWA
EQGVLLLNTTMTVERANAASHAKKGWELFTDRIIQVVSEQCPNVVFLLWGAHAQSKQKLI
DGTKHLVLKSVHPSPLSAYRGFIGCGHFSRTNSFLEQRGLGPIDWALPPL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgacgatcgcatcaaactcgaacccagctggaaggccgcattgcgcggtgaa
ttcgaccagccttacatgcaccagctgcgcgaatttctgcgtggtgagtacgctgccggc
aaggaaatctacccgccagggccgctgatcttcaatgcgctcaattcgacaccgctggac
caggtgaaggtggtcatcctcggtcaggacccgtatcacgggccggggcaggcccatggc
ttgtgcttctcggtgcaaccgggcgtggccacgccgccgtcgctggtcaatatctacaag
gagctgcagcgcgacctgaacatcccgatccccagccacggctacctccagagctgggca
gaacaaggcgttctgttgctcaacacgaccatgaccgtcgagcgcgccaatgccgcgtcg
catgccaagaaaggctgggaattgtttaccgaccggatcattcaagtggtcagtgagcaa
tgcccgaacgtggtattcctgctatggggggcgcatgcacagagcaagcagaagctgatc
gacggtaccaagcacctggtactgaagtcggtccatccttcgccgctgtcggcgtatcgc
gggttcatcggttgcgggcatttcagccgtaccaacagcttcctcgagcagcgggggctc
gggcccatcgactgggcactgcccccgctgtga
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