Pseudomonas sp. JY-Q: AA098_06025
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Entry
AA098_06025 CDS
T09824
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
psjy
Pseudomonas sp. JY-Q
Pathway
psjy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psjy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AA098_06025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psjy02000
]
AA098_06025
Transporters [BR:
psjy02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AA098_06025
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GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Phosphonate-bd
Glyco_hydro_62
Motif
Other DBs
NCBI-ProteinID:
ANI33071
LinkDB
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Position
complement(1357091..1358242)
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AA seq
383 aa
AA seq
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MSVHKTALLGATTCAMLASASLQAAEAPKALGAGEGRLDIVAWPGYIERGESDKAYDWVT
GFEKETGCKVSVKTAATSDEMVSLMTKGGYDLVTASGDASLRLIAGKRVQPINTALIPNW
KTIDPRLQNGGWYVVDKQVYGTPYQWGPNVLLYNTNTFKQAPTSWSVVFEPQNLPDGKPN
KGRVQAYDGPIYIADAALYLKSARPELGIKDPYELNEAQYKAVLELLRQQQPLIHRYWHD
ATVQMSDVKNEGVVASSSWGYMVNGLKAENQPVASTIPKEGATGWADTTMLHAEAKHPNC
AYKWMDWSLQPKVQGDVAAWFGSLPAVPAACTGSELLGAEGCKTNGFDNFDKIAFWKTPQ
AQGGKFVPYSRWTQDYIAIMGGR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgcacaagaccgcattgctcggcgccaccacctgcgccatgctggccagcgcc
agcctgcaggccgccgaagcgcccaaggccctgggggccggcgaggggcgcctggacatc
gtcgcctggcccggctacatcgaacgcggtgaaagcgacaaggcctacgactgggtgacc
ggtttcgaaaaggaaaccggctgcaaggtcagcgtgaaaacggccgccacctcggacgag
atggtcagcctgatgaccaagggcggctatgacctggtcaccgcctcgggcgatgcatcg
ctgcggctgattgcaggcaagcgcgtacagccgatcaacaccgccttgatccccaactgg
aaaaccatcgacccgcgcctgcagaacggtggctggtatgtggtcgacaagcaggtgtac
ggcacgccgtaccagtgggggccaaacgtgctgctgtacaacaccaacaccttcaagcag
gcacccaccagctggagcgtggtgttcgagccgcagaacctgcccgacggcaagccaaac
aagggccgcgtgcaagcctatgacgggccgatctacatcgccgatgcagcgctgtacctg
aagtcggccaggcccgaactgggcatcaaggacccgtacgaactgaacgaggcacaatac
aaggccgtgctggaattgctgcgccagcaacaaccgctgatccaccgctattggcatgac
gccacggtccagatgagcgatgtgaaaaacgaaggcgtggttgcctccagctcctggggc
tacatggtcaatggcctcaaggccgagaaccagccagtggcctcgaccattcccaaggag
ggcgcgaccggctgggccgacaccaccatgctgcacgccgaggccaagcaccccaattgc
gcctacaaatggatggactggtcgttgcaacctaaggtgcaaggcgatgtggcggcctgg
ttcggctcgttgccggctgtgccggcggcgtgcaccggcagcgagctgctgggggccgag
ggctgcaagaccaacggctttgacaacttcgacaagattgccttctggaaaacaccgcag
gcccaaggcggcaagttcgtgccttacagccgctggacccaggactacattgcgatcatg
ggtggtcgctga
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