Pseudomonas sp. JY-Q: AA098_06440
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Entry
AA098_06440 CDS
T09824
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
psjy
Pseudomonas sp. JY-Q
Pathway
psjy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psjy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AA098_06440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psjy03400
]
AA098_06440
DNA repair and recombination proteins [BR:
psjy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
AA098_06440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
ANI33151
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All DBs
Position
complement(1449430..1452003)
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AA seq
857 aa
AA seq
DB search
MSDLSAHTPMMQQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAG
QSIPMCGIPFHSLEGYLAKLVKLGESVVICEQIGDPATSKGPVERQVVRIITPGTVSDEA
LLDERRDNLIAALLGDERLFGLAVLDITSGNFSVQEIKGWENLLAELERLNPVELLIPDD
WPRDLPAEKRPGARRRAPWDFDRDSARKALCQQFATKDLKGFGCDKLTLAIGAAGCLLTY
AKETQRTALPHLRSLRHERLDDTVILDGASRRNLELDINLAGGRDNTLQSVIDRCQTAMA
SRLLSRWLNRPLRDLKVLQARQDSIRCLLDSYRFEKLQPQLKEIGDIERILARIGLRNAR
PRDLARLRDALGALPELQNAMTELEAPHLARLAAITGTYPELASLLERAIIDNPPAVIRD
GGVLKAGYDNELDELLAISENAGQFLIDLETREKARTGLANLKVGYNRVHGYFIELPTKQ
AEQAPGDYIRRQTLKGAERFITPELKAFEDKALSAKSRALAREKMLYDALLETLISHLAP
LQDSAAALAELDVLSNLAERALNLDLSCPRFVDEPCLRIEQGRHPVVEQVLTTPFVANDL
GLDNSTRMLIITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSD
DLAGGRSTFMVEMSETANILHNATDRSLVLMDEVGRGTSTFDGLSLAWAAAERLAQLRAY
TLFATHYFELTVLPESEPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVP
TAVIQRAREHLGRLETTSLPHEQPAAHKAKDAPQVPHQSDLFASLPHPAIEKLGKLQLDD
MTPRQAIEMLYQLKNLL
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatctttccgcacacacaccgatgatgcagcagtactggaagctgaaaaaccag
cacccggaccagctgatgttctaccgcatgggcgacttctacgagatcttctacgaagat
gcgaaaaaggccgcgaaactgctggatatcaccctgaccgcccgcggtcagtcggccggc
cagtccatccccatgtgcgggattccgttccattcgctggagggctacctggccaagctg
gtcaagctcggcgagtcggtggtgatctgtgagcagatcggcgaccccgccaccagcaag
ggcccggtggagcgccaggtggtgcgcatcatcacccccggcacggtcagcgacgaggca
ctgctcgacgagcgccgcgacaacctgattgccgcactgctcggtgacgagcgcctgttc
ggcctggcggtactggacatcaccagcggcaatttcagcgtgcaagaaatcaagggctgg
gaaaacctgctggccgaactcgagcgcctgaacccggtcgagctgttgatccccgacgac
tggccacgggacctgcctgcggaaaaacgcccaggcgcccgccgccgcgccccctgggac
ttcgaccgcgactcggcacgcaaggccctgtgccaacagttcgcgaccaaggacctcaag
ggcttcggctgcgacaagctgaccctggccatcggtgccgccggctgcctgctgacctac
gccaaggaaacccagcgcaccgcgctgccgcacctgcgcagcctgcgccacgagcgcctg
gacgatacggtcatcctcgatggggccagccgccgcaatctggagctggacatcaacctg
gccggcgggcgcgacaacaccctgcaatcggtgatcgaccgctgccagaccgccatggcc
agccgcctgctgagccgctggctgaaccgcccactgcgcgacctcaaggtgctgcaagca
cgccaggactcgatccgctgcctgctcgacagctaccgcttcgagaagctgcagccgcag
ctgaaggagattggcgatatcgagcggatcctcgcccgtattggcctgcgcaatgcccgc
ccgcgcgacctggcacgcctgcgcgatgcactgggtgcgttgccagagctgcagaacgcc
atgaccgagctcgaagcgccgcacctggcgcgtctggcggccattaccggtacctatccg
gaactggccagcctgttggagcgggcgatcatcgataacccgccggcggtgatccgcgac
ggcggtgtactgaaagccggctatgacaacgaactggacgagctgctggcaatcagcgag
aacgccggtcagttcctgatcgacctggaaacccgggaaaaggcccgcaccggccttgcc
aacctcaaggtcggctacaaccgcgtgcacggctacttcatcgaactgccgaccaagcag
gccgagcaggccccgggcgactacatccgccgccagaccctcaaaggcgccgagcgcttc
atcaccccggagctcaaggcgttcgaggacaaggcattgtcggccaagagccgcgccctg
gcccgcgagaagatgctctacgacgcgctgctggaaaccctgatcagccacctggcaccg
ctgcaggacagcgccgccgccctggccgaactggatgtgctcagcaacttggccgagcgc
gcactgaacctcgacctgagctgcccacgctttgtcgacgagccttgcctgcgcatcgag
cagggccgccacccggtggtggaacaggtactgaccacgccgttcgtggccaacgacctg
ggcctggacaacagtacgcgcatgctgatcatcaccggccctaacatgggcggtaaatcg
acctacatgcgccagactgcgcttatcgtgctcctggcccacatcggtagcttcgtgccg
gcagccagctgcgagctgtcgctggtcgaccgcatcttcacccgcatcggctccagtgac
gacctggccggcgggcgctcgaccttcatggtggagatgagcgagaccgccaacatcctg
cacaacgccaccgaccgcagcctggtgctgatggacgaagtgggccgcggtaccagcacc
ttcgatggcctgtcgctggcctgggccgccgccgagcgcctggcccagctgcgtgcctac
acactgttcgccacccactacttcgaactgaccgtgctgccggagagcgagccgctggtg
gccaacgtgcacctgaacgccaccgagcacaatgaacgcatcgtgttcctgcaccacgtg
ctacccggccctgccagccaaagctacggcctggccgttgcacagctggccggcgtaccg
acggcagtgatccagcgtgctcgcgaacaccttggccggctggaaaccaccagcctgccc
catgagcagcctgcggcccacaaggccaaggacgcgccacaagtgccacaccagagcgac
ttgtttgccagcctccctcatccagccatcgagaagctgggcaagctgcagctggacgac
atgaccccgcgtcaagctatcgaaatgctatatcaactaaagaacctgttataa
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