Pseudomonas sp. JY-Q: AA098_08080
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Entry
AA098_08080 CDS
T09824
Name
(GenBank) hypothetical protein
Organism
psjy
Pseudomonas sp. JY-Q
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Collagen
DUF6443
Motif
Other DBs
NCBI-ProteinID:
ANI33449
LinkDB
All DBs
Position
complement(1794269..1799482)
Genome browser
AA seq
1737 aa
AA seq
DB search
MIATSSAHSNAFNFLGFMQGGVDPRTGQYTLGIELPKIVANNLIGPNLPLALNYSPLQDE
DHGYGSGWSINLSRYDVSSRALSLINGESYRVTSVSSKPAYIHEQKIVSFEFYKDDEFNY
RVIHRSGMIEHLRTYSENGKQIALPYRIYSSTGHWVELTYEAKPENRNHQCLSEVHDATG
KRLLWVEYQSVDRYSIHLYPDDNASTYVVSLKARDVSEVLLPDDRGAKWRFGYLKDASTQ
NMQCLQTIHTPSGSFEHLSYDNAGHLMPKGSPIPRLPRVETHQVNPGFEQPAMVTRYSYS
AENFMGGNSNMPWTEGEDTLFKLPGVYTYSSSQLHEVGGELVRKVTRIYNRYHLMTKEIT
EEFGRVAQPVAPLDGTAAEPKDDWHIRETETSYHENPNVEFALQPRYYQAPKFVVERWKL
KDDPTQLRQEVTTTLYDDHGNQTLELQPDGVFTVSEYYEAGEQDGCPADPLGFKRSLAKR
TVYPSGTQPPSWVPPEDMPATVPAPVAVESGAPIMTTYLRYQLFDMLSEESRLVGAPSQY
LVEESITECSGLGDDERLLERTTQGYHHAPDQPALHGRQITEEKILYNPQAKGLLASEEK
VSTRWSYPGATTKKREAPLEIKETVTCRGVQKSFVRSVSSLTGQTLMEQDVHGVAIEYEY
DALQRVIKQTLAAGSPNASVRSYSYRLVAAEGQQAGMTVTDPSNVVTHTFYDGLNRAISQ
TRQTENAEQPQLVYEAMHDALGQLIRDTTYDYHPRLKGGMLAIDTHYSYDAWGELCETLN
ADGTRQHTAFSPFGTQGDMVANWMTSPTQPELRQHFTLTQSNLKEKPWQIERFDAGRKQV
ARQNFFYDGLGQSTREEQRIRDPESNNETLTVSKYQYDEYGRMTYTERPDGTAMSRTFAP
HSRNELVETMYVHEKRKGKRTLAAGELAHARTYDGQERMLTFSDGKRTEHYEYKDKAGND
SEQQLASKRITQSKREFNFSYDPTLSLQPTSITVGQNQPTAYEYGHHSPAISRAVNDHGT
RTYDYTDQGYLRQETWDDAQAAKQYVCTHTTSLQGRQLLRESSDNITTEHGYDDIGRLSW
TTQGNLRSDFEYNDDGRLKLTKTQDLKTLHRVDCEQVYDSHGQEIDRILSRYNDQLKTTE
HRISQVWRNDGLLHSRTLYHEGELQLTEFFDYDPRKRLESYWCEGKQDAFPRNAKGDPIE
EQVFTYDDLDNLVKCETWFPDTPKHTATYRCEGFQLMQVTHSPPGYLPDRDIRYDDDGNM
LNDEAGNQLVYDDHGRLAQVLSEGGDTLFSYRYDGHDHLVGVRHGNGAEVLRRYQNDRLH
TTIDNDVRTEYLYEGSRPLGLQSSNDSDGSRLLLTNMSNSVLGESTKDTVCEARYSAYGD
NGKEDPDNALHGLLAFNGEARERALGWYLLGRGYRAYNPQLMRFHSPDSMPPEIAGINPY
QYCLGDPVNWRDPSGHASYRAPSDEPAIGFRKRKGPSKTGAWIQLGVSIAVAVISAIPFV
GSLIKVSATVGLMAASMTTKVLMVVGAVGVAAMAAGLGLQTMAIFEKNQAKQTLYQSIGG
GLSMLGGIAAGFSGYKTWSYAKAEKAKKAANAKAAEAATEKPATSADTGPSGVASDVDAI
KSSVEAANAKATDALRKVDELALQQGPQGDRGPAGPTGPTGPAGADGQPGPRGPRGYSTS
ISGVKDAVFDILRDFGLIPTPSGGSENSAKASTPVVTSFGMTPAGARDLANSFKKDN
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccacctcgtccgcgcactccaatgcgttcaactttctcggtttcatgcaaggc
ggagttgatccgcgcaccggccagtacacactgggcatcgaactgcccaaaatagtcgcc
aacaacctgatcggccctaacttaccccttgcactgaactacagcccgttgcaagatgaa
gaccatggctatggatcaggctggagcatcaacctcagccgctatgatgtcagtagtcgg
gccttgtcgctcatcaacggtgaaagctatcgtgtgaccagcgtctcatccaaacctgct
tatattcatgagcagaaaattgtgagcttcgagttttacaaagacgacgaattcaactac
cgcgtcattcatcgctcgggcatgattgaacacctgcgcacttattctgaaaatggcaag
caaattgcgctgccgtatcgaatctattcctcgactgggcactgggtcgaactcacctac
gaggccaaacctgaaaacagaaatcaccagtgcctaagcgaagttcacgatgcaacgggc
aagcgcctgttatgggtggaataccagagcgtcgaccgctacagcatccatttgtacccg
gacgataacgccagcacttatgtggtctcgctcaaagcacgcgacgtcagcgaggtcttg
ctacccgatgaccgcggtgcgaaatggcgtttcggctatctcaaagatgcctctacccag
aacatgcagtgcttgcagaccatacacacgcctagcggcagcttcgaacaccttagctat
gacaatgcaggccacctaatgcccaaaggtagccccatacccaggctgcccagggtcgaa
acacaccaggtgaacccgggtttcgaacagcctgcaatggtgacccgttacagctactcc
gcagaaaatttcatgggcggaaatagcaacatgccttggacggagggggaagatacactc
ttcaagctaccaggggtttatacctacagctcctcgcaactacatgaagtaggtggtgag
ctggttcgaaaggtcactcgcatttacaaccgctaccatctgatgaccaaagagattacc
gaagagttcggccgggtcgctcagccagtagcgccgctggatggcacagccgcagagccg
aaggacgactggcacatccgtgagaccgagacgtcataccacgaaaacccgaacgtggag
ttcgccctgcagcctcggtactaccaggcgccaaagttcgttgtcgagcgctggaagcta
aaggacgatcccactcagctgcgccaggaagtcaccacaaccctgtacgatgaccacggt
aatcagaccctggagctacagcctgacggtgtgtttaccgtcagcgaatactacgaggcc
ggggagcaggatggctgccctgcagacccgctaggcttcaagcgcagcctcgccaagcgc
acggtgtacccatcggggacacagccaccctcctgggtcccgcccgaggacatgcccgcc
accgtccccgcgcctgtggcggtcgaaagtggcgcaccgataatgaccacgtatctgcgc
tatcagctgttcgacatgctgtccgaagaaagccgtcttgtcggtgcaccgagccaatac
ctggttgaagagagcatcactgagtgcagcggcctcggggacgacgagcgactgctggag
cggaccacgcagggttaccaccatgcgccagaccaaccggcgctgcacggccgtcaaatc
actgaagaaaaaatcctgtacaacccccaggccaaaggcttgctggccagcgaggaaaaa
gtttccacacgctggagctacccgggcgcgaccacgaagaaacgtgaggcaccgcttgaa
atcaaagaaaccgtaacctgcagaggcgtgcaaaaaagctttgtacgctcggtttccagc
ctgacaggccaaacgctgatggagcaagatgttcacggtgtagccatcgagtacgagtat
gacgcgctgcaacgggtgatcaaacaaaccctcgctgcgggtagcccgaatgcgtccgtt
cgctcgtatagctatcgcttggtcgccgccgagggccagcaggccgggatgacggttacc
gacccttccaacgtggtcacccataccttttacgatggtctcaaccgcgccatcagccag
acacgccaaactgaaaacgcagagcaaccccagctggtttacgaggcaatgcatgacgca
ttggggcagttgatccgcgatactacctacgactaccatcctcgcctcaagggcggcatg
ctggccatcgatacccactacagctatgacgcctggggcgagctttgcgaaaccctgaat
gctgacggcacccgacaacacactgccttctccccgtttggcacccagggtgacatggtc
gccaactggatgaccagtcccacccagccggagctgcgccagcatttcaccctgacccaa
agcaatttaaaggaaaagccgtggcaaatagagcgctttgatgccggccgcaaacaagtc
gcgcgtcagaacttcttttacgatggcctaggccaaagcacccgtgaagagcagcggatt
cgagacccggaaagcaacaatgaaacactgacggtcagcaaataccagtacgatgagtac
ggccgcatgacgtacaccgaacgaccagacggcactgcgatgagcagaacatttgcgccg
cacagccgcaatgaactggtcgaaacgatgtatgtgcacgagaaacgcaaaggtaaacga
acgctggctgctggcgagttggcccatgcgcgtacgtacgatgggcaagagcgcatgctg
accttcagtgacggtaaacgcacggaacactacgagtacaaagacaaggctggcaacgac
agcgagcaacaactggccagcaaacgtatcactcaaagcaagcgagaattcaacttcagc
tacgaccccaccctttccctgcaacccacttccatcacggtagggcaaaaccagccgacc
gcttatgaatacggacatcattcccctgccatcagccgtgccgtcaacgaccatggcacg
cgcacctatgactacaccgaccaaggctacctgcgacaggagacctgggacgacgcgcag
gctgccaagcagtatgtttgcacgcataccacctcgcttcagggccgacagttactgcgc
gagagcagtgataacatcacgactgaacacggttacgatgacatcggccgccttagctgg
accacccagggcaacctgcgctcagacttcgagtacaacgatgatgggcggctgaaactg
accaaaacccaagacctgaaaaccttgcatcgtgtcgactgcgagcaggtctacgatagc
catggccaggagatcgaccgcattctgagccgctacaatgatcagctcaaaacgactgaa
caccgtattagccaagtctggcgtaacgacggcctgctccatagccgcacgctgtaccac
gagggtgaactgcagctcacggaatttttcgactacgatccacgcaaacggcttgagtcg
tattggtgcgagggtaagcaggacgcgttcccccgcaacgccaaaggggacccgatcgaa
gagcaagtgttcacttacgatgatctggataacctggtgaaatgcgaaacctggttcccc
gatacccctaagcataccgccacgtatcgctgtgaaggcttccagttgatgcaggtgacg
cattctccccctggctacctgcccgaccgcgatattcgctacgatgatgatggcaacatg
ctcaacgacgaagctggcaaccagctcgtctatgacgaccatggccgcctcgcacaagtg
ttgagcgagggtggcgacacgctgttcagttaccgctacgacggccacgatcaccttgta
ggcgtgcgccacggcaatggtgcagaggtgctgcgccgctatcaaaacgaccgtttgcac
accacgatcgacaacgatgtacggaccgagtacttgtatgagggcagccgcccactgggc
ttgcaatcgagcaacgacagcgatggtagtcgcctgctactgaccaatatgagcaatagc
gtgctaggtgagagcacaaaggacacggtgtgcgaagcccgttacagcgcttatggcgac
aacggcaaagaagaccctgacaacgcgctgcacggcttgttggccttcaacggcgaggcg
cgtgaacgcgccttgggttggtacctgctggggcgaggttaccgcgcctataacccgcag
ctgatgcgcttccacagcccggactcgatgccacctgagatcgcgggtatcaacccctat
caatactgccttggcgacccggtgaactggcgcgatcccagcgggcatgcgagctacagg
gcaccttcagacgaaccggcgatcgggttcaggaagaggaaaggtcccagtaaaaccggg
gcgtggattcagttgggcgttagtatcgctgtcgcggtgattagcgccatcccatttgta
gggagcttgataaaagtctcagctacggttgggctcatggcggcgtcgatgactacgaag
gtattgatggtcgtgggcgcggtaggggtggctgccatggctgcgggccttggacttcag
actatggctattttcgagaagaaccaagcaaaacaaacgttgtatcagtcgatcggtggc
gggctctccatgctaggtgggatagccgccggtttctcagggtacaagacgtggtcatac
gcgaaagctgaaaaagcaaagaaagccgctaatgcaaaagccgcagaagccgcaactgaa
aaacctgccacgagcgctgatacaggcccttctggtgttgccagcgacgttgatgcgatt
aaaagctcggtagaggcggcgaacgctaaagccaccgatgcactgaggaaagttgacgag
ctcgcgctgcagcagggccctcaaggtgacaggggcccagccggaccaaccggaccaacc
ggaccagctggagccgatggacagccaggaccccgtggcccccgggggtactccacttcc
atatcaggcgtaaaggatgcggtgtttgacattctaagagattttggccttataccaacc
ccctctggcggatcggaaaacagtgcgaaagctagtacgccagtagtcacgagtttcggg
atgactcctgctggcgctcgtgatctagcgaacagcttcaagaaagataactag
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integrated database retrieval system
