Pseudomonas sp. JY-Q: AA098_09110
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Entry
AA098_09110 CDS
T09824
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
psjy
Pseudomonas sp. JY-Q
Brite
KEGG Orthology (KO) [BR:
psjy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psjy01011
]
AA098_09110
Enzymes [BR:
psjy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
AA098_09110
Peptidoglycan biosynthesis and degradation proteins [BR:
psjy01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
AA098_09110
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Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
TPR_19
Motif
Other DBs
NCBI-ProteinID:
ANI33633
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All DBs
Position
complement(2039578..2041503)
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AA seq
641 aa
AA seq
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MRSRLLHIASCLLLTAATCAAQATDLTLQRQYYDEAKRALAKGDKGPYLRYAQALSDYPL
TPYLVYDELTARLKSASNQEIEGFLAKHGDLPQANWMKLRWLRWLAERGEWDTFVKYYDP
KLNFTELDCLNGQYQLSHGLRAEGYATADKLWSVGKSQPAACDTLFGMWAAEGQLTEAKR
WERTKLAAQARNYGLANTLVKTLTTLGPQGRLLIDVAQKPELLNQPSRFTPVNEAMSDVV
SLGLRRLARQDPERAMALLDDYAQRMHFSRDEKVAIAREIGLTLARRYDPRALDLMTRYD
PELRDNTVSEWRLRLLLRLGRWEDAYELTKRLPQDLASTSRWKYWQARSLELAQPNNPQI
PLLYKTAARERDFYGFLAADRAQTPYQLNNKPLLLSPQLVKKVRNTPGIQRALEFHARGQ
IVDGRREWYHVSRHFTRDEMVAQARLGYELRWYFPAIRTISQAQYWDDLDIRFPMAHRDT
LVREAKVRGLHSSWVFAITRQESAFMEDARSPVGASGLMQLMPATAKETARKFSIPLASP
AQVLNPDKNIQLGAAYLSQVHSQFNGNRVLASAAYNAGPGRVRQWLKGAKHLSFDVWVES
IPFDETRQYVQNVLSYSVIYGQKLNSPQPLVDWHERYFDDM
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagccgcctgttacatatcgcatcctgcctgctgcttaccgctgccacctgcgca
gcgcaggccaccgacctgaccctgcaacgccagtactatgacgaggccaagcgagcgctg
gccaaaggcgacaaaggcccgtacctgcgctatgcccaggccttgagcgactacccgctg
acgccctacctggtctacgacgaactcaccgcccgcctgaagagtgccagcaaccaggaa
atcgaaggtttccttgccaagcatggcgacctgccccaggccaactggatgaaactgcgc
tggttgcgctggctggccgaacgcggcgagtgggataccttcgtcaagtactacgacccc
aagctcaacttcaccgaactggactgcctcaacggccaataccagctcagccacggcctg
cgcgccgaaggttacgccaccgccgacaagctgtggagcgtcggcaaatcgcaacctgcc
gcctgcgacacgctgttcggcatgtgggcagccgaaggccaactgaccgaggccaagcgc
tgggaacgcaccaagctggccgcccaggcgcgcaattacggcctggccaacaccctggtc
aagaccctgaccaccctcggcccgcaggggcgcctgctgatcgacgtcgcgcagaagccc
gagctgctcaaccagccgtcgcgctttaccccggtcaacgaggccatgtccgacgtggtc
agcctcggccttcgtcgcctggcccggcaggacccggagcgggccatggcgctgctcgac
gattacgcccagcgcatgcacttctcgcgtgacgaaaaggtggccatcgcccgcgaaatc
ggcctgaccctcgcacgccgctacgacccacgcgcgctcgacctgatgacccgctatgac
cccgagctgcgtgacaacactgtcagcgaatggcgccttcgcctgctgctgcgcctgggc
cgctgggaggacgcctacgagctgaccaaacgccttccccaggacctggccagcaccagc
cgctggaagtactggcaggctcgcagcctggagctggcacagccaaacaacccgcagatc
ccgctgctttacaagaccgcagcgcgtgagcgtgacttctatggcttcctcgccgccgat
cgggcacagacaccctaccagctgaacaacaagccgctgctgctgagcccacaactggtc
aagaaggtccgcaacacgcccggcatccagcgcgcactggaattccacgcccgcggccag
atcgtcgacggccgccgtgagtggtaccacgtcagccgccacttcacccgtgacgaaatg
gttgcgcaggcacgcctgggttatgagctgcgctggtacttcccagccatccgcaccatc
agccaggcccagtactgggacgacctggacatccgctttcccatggcccaccgcgacacg
ctggtgcgtgaagccaaggttcgcggcctgcattcgagctgggtattcgccatcactcgc
caggaaagcgcctttatggaggacgcacgctcacccgtgggcgccagcggcttgatgcaa
ctgatgccggccacggccaaagaaaccgcacgcaagttcagcatcccgctggcctcaccg
gcgcaagtgctgaacccggacaagaacatccagctgggtgcggcctacctgagccaggta
cacagccagttcaacggcaaccgggtgctggcttcggcagcctacaacgccggccccggg
cgcgtgcgacagtggctcaaaggggccaagcacctgagcttcgatgtgtgggtggagtcg
atcccgttcgacgaaacacgccagtatgttcagaacgtgctgtcgtattcggtgatctac
gggcagaagctgaattcaccgcagccactggtggattggcatgaacggtatttcgatgac
atgtga
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