Pseudomonas sp. JY-Q: AA098_09885
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Entry
AA098_09885 CDS
T09824
Name
(GenBank) transcriptional regulator HU subunit alpha
KO
K03530
DNA-binding protein HU-beta
Organism
psjy
Pseudomonas sp. JY-Q
Brite
KEGG Orthology (KO) [BR:
psjy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psjy03032
]
AA098_09885
03036 Chromosome and associated proteins [BR:
psjy03036
]
AA098_09885
03400 DNA repair and recombination proteins [BR:
psjy03400
]
AA098_09885
DNA replication proteins [BR:
psjy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AA098_09885
Chromosome and associated proteins [BR:
psjy03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AA098_09885
DNA repair and recombination proteins [BR:
psjy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AA098_09885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Barstar
Motif
Other DBs
NCBI-ProteinID:
ANI33771
LinkDB
All DBs
Position
2209714..2209986
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDAIAASADIPKAVAGRALDAVIESVTGALKQGDDVVLVGFGTFSVKERAERTG
RNPQTGKAIKIEAAKVPGFKAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcggaactgattgacgctatcgccgcatctgcagacatcccgaaagctgta
gccggccgtgcgctggacgcagtcatcgaatccgtcaccggcgccctgaagcaaggtgac
gatgtggtactggttggctttggtaccttctcggtcaaggagcgcgccgagcgtaccggc
cgcaacccgcaaaccggcaaggcaatcaaaatcgaagccgccaaggttccaggtttcaag
gcaggcaaaggcctgaaagacgccgtcaactaa
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integrated database retrieval system
