Pseudomonas sp. JY-Q: AA098_10140
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Entry
AA098_10140 CDS
T09824
Name
(GenBank) exodeoxyribonuclease X
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
psjy
Pseudomonas sp. JY-Q
Pathway
psjy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psjy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AA098_10140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psjy03400
]
AA098_10140
DNA repair and recombination proteins [BR:
psjy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AA098_10140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
QSregVF_b
zf-C2H2_ZNF462_11
AdoMet_dc
Motif
Other DBs
NCBI-ProteinID:
ANI33820
LinkDB
All DBs
Position
complement(2257542..2258213)
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AA seq
223 aa
AA seq
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MNACIFDSETTGLNDPQLVEAAYLQLADTLSLQVATEFLQRYKPGKAIELGALATSHILD
EELAECPDHTEFQLPAEIEYLVGHNVDYDWGVIGQPDLKRICTAALSRRLWPDADSHSQS
AMIYLHYREQAPGLLRNAHAALDDVKNCRLLLVKILDALAAELGRPVASWEELWTISEDA
RIPTVIGFGKHRGAKFSDLPADYRRWLLNRPDLDPFVRKALQR
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcctgcatcttcgacagcgaaaccactggcctgaacgacccgcagttggtcgag
gccgcatatctgcagttggcagacactcttagcctgcaggtggccaccgagtttctccag
cgctacaagccgggcaaggccatcgaactcggcgccctggccaccagccacatcctcgac
gaggagctggcggagtgcccggaccacactgaattccaactgcctgccgagatcgagtac
ctggtcggccacaacgtcgactacgactggggcgtcatcggacagccggatctcaagcga
atctgtaccgcagcgctgagccgtcgcctgtggcctgacgccgacagccactcgcaatcg
gcgatgatctacctgcactaccgcgagcaagcgccgggcctgctgcgcaacgctcacgcc
gcgctggacgacgtgaaaaactgccgccttctgctggtcaagatcctcgacgctctagct
gccgagttgggccgcccggtggccagctgggaagaactctggaccatctccgaagacgcc
cgcatccccaccgtgattggcttcggcaagcaccgcggcgccaaattcagcgacctgccg
gccgactaccgccgctggctcctaaaccggcctgacctcgacccgttcgttcgcaaagca
ctgcagcgctag
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