Pseudomonas sp. JY-Q: AA098_11260
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Entry
AA098_11260 CDS
T09824
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
psjy
Pseudomonas sp. JY-Q
Brite
KEGG Orthology (KO) [BR:
psjy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psjy03000
]
AA098_11260
Transcription factors [BR:
psjy03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AA098_11260
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GFIT
Motif
Pfam:
HTH_1
LysR_substrate
MarR_2
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ANI34026
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Position
2463818..2465011
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AA seq
397 aa
AA seq
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MIDVELPNLMQVRAFIRVAELGSVSRATEVLFRAQSVVTRAIAELEARFAVPLFERHANG
MRLTDYGECLLPRAQRVLAELDGVPSLLGTAQGEPLYLFQARRLQVFVKLCETRHMQTVA
RHFGLSQPAVSAALKVLEGGCGQPLFVRTSRGLQPTVASRDILFPIRRALNELRLLDSDL
SAMQGTLRGVVHVGALPLGRSRILPDAILRFTAQHPQVRVVTNESPFDLLATELRVGDVD
FVLGALRPHDYASDLVGEPLINEEMVVLARRGHPLLHTHLTLKDVHQARWVLPRAGSPAR
QLLDNCFAAAGLTAPWPVVESADLAVIRGLLVRSDMLAAVSAHQLAYEIASGELQRLPLA
LPGTARAIGLMQRSGCLQSPAAVALMACIRQVITEQA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatgtcgaactgcccaacctgatgcaagtccgcgcgttcatccgggtagccgag
ttgggcagcgtttcgcgggcgacggaagtgttgttccgtgctcagtccgtggtcacccgc
gccatcgccgagctggaggcgcgctttgccgtgcccctgttcgagcgccatgccaatggc
atgcgcctgaccgactatggcgagtgcctgctgccgcgcgcacagcgcgtgctggcggaa
ctggacggcgtgccgagtttgctgggcaccgcgcagggcgagcccctctacctgtttcag
gcgcggcgcctgcaggtgttcgtgaagctctgtgaaacacggcacatgcaaaccgtggcg
cggcacttcggccttagccagccggcggtcagtgcggccttgaaggtgctcgaaggcggg
tgtggacagcccttgttcgtgcgcacgtcgcgcggcctgcagcccactgtggccagccgg
gacattctgttccccatccgccgggcgctgaacgagttgcgcctgctggacagtgacctg
agcgcgatgcaaggcaccctgcgcggggtggtgcatgtcggcgcgctgccgctggggcgc
tcacgcattctgccggatgctattttgcgcttcacggcccagcacccacaggttcgggtg
gtgaccaacgaaagcccgttcgacctgctggcaaccgagctgcgggtaggggatgtggat
ttcgtcttgggcgccttgcggcctcacgactatgccagcgatctggtgggcgagccgctc
atcaacgaggaaatggtggtgctggcccgtcgagggcacccgctgttgcacacacacctg
acgctcaaggacgtgcaccaggcgcgctgggtgttgccgcgggccggttcgccggcccgc
cagctgctcgacaactgcttcgccgccgcgggcctgacagcgccgtggccggtggtggaa
agcgctgatctggcggttatccgtggcctgctggtgcgttcggatatgctggcggcggtg
tctgcgcaccagttggcttacgagattgccagcggcgaactgcaacgcctgccgctggca
ctgcccggcactgcccgcgccatcggcctcatgcagcgcagtggctgcctgcagtcaccg
gcggcagtcgcgctgatggcctgtatccgccaggttatcaccgagcaggcataa
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