Pseudomonas sp. JY-Q: AA098_11855
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Entry
AA098_11855 CDS
T09824
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psjy
Pseudomonas sp. JY-Q
Pathway
psjy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psjy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AA098_11855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psjy03021
]
AA098_11855
Transcription machinery [BR:
psjy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AA098_11855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
PhyR_sigma-like
HTH_23
DUF6362
Motif
Other DBs
NCBI-ProteinID:
ANI34141
LinkDB
All DBs
Position
2609588..2610100
Genome browser
AA seq
170 aa
AA seq
DB search
MIDAAPPPEPGLPALYREHRGWLETWLRRRMGNAWDAADLSQDTFLRILASAQPLADIRE
PRAYLLTVGKRLLSNFHQRRSLERAYLDALAQLPEQHVPSPEQRWVLLETLQALDELLDG
LKPPIRKAFLWSQLEGLGYAEIGQRLGVCQRSVKRYMAQAYEHCLLAELQ
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgccgcgccgccaccggagcctggcctgcctgccctgtaccgggagcatcgc
ggctggcttgaaacctggctgcgccggcgtatgggcaatgcctgggatgccgccgacctc
agtcaggatacttttctgcgcattctggccagcgcccagccgctggcagacatacgcgaa
ccgcgtgcctacctgctgaccgtgggcaagcgtttgctcagcaacttccaccagcgccgt
agcctggagcgggcctaccttgatgccttggcgcagttgcccgagcaacacgtgccgtcg
ccagaacagcgctgggtactgctcgaaaccctgcaagcactggatgaattgctcgacggc
ctcaagccgccgatacgcaaggcctttctctggagccagctggaaggcttgggctacgcc
gagattggccagcgcctgggcgtctgccagcgctcggtgaaacgctacatggcgcaggct
tacgaacattgcctgttggccgagttgcaatga
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