Pseudomonas sp. JY-Q: AA098_12550
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Entry
AA098_12550 CDS
T09824
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
psjy
Pseudomonas sp. JY-Q
Brite
KEGG Orthology (KO) [BR:
psjy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psjy02000
]
AA098_12550
Transporters [BR:
psjy02000
]
Other transporters
Pores ion channels [TC:
1
]
AA098_12550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
AsmA
DUF3237
Motif
Other DBs
NCBI-ProteinID:
ANI34271
LinkDB
All DBs
Position
2771433..2775107
Genome browser
AA seq
1224 aa
AA seq
DB search
MKRVIKFTSLGLLGGVASMGLVLGLLLGTQAGSRWALGKVPGLEVADFQGRLAGSWQASR
LTWADGGSTVEMQAPSLAWSPACLLRASLCIDRLQADRIDMAFAPSTEPTESAPLQLPTL
RLPLAIELGEVKVGQLRLDGSDLLGDLQLAAHWTSSGIRIDSLRLLRDDLQLSLQGDLQP
EGDWPVTLQAQLQLPAVDEKPWQLALTAKGQLQKTLELAGTSSGYLDATLSGQLQALAEH
LPATLHIRSEAFKPAGALPDTLQLNALELDAKGDLLDGYQLSGRASLPAEQSPIALVLSG
LVDSKGARLDALDLTASDSQRVKLQATADWQQGLSADAQLDWQDFPWLRLYPLETPPEVT
LKRFNTQVHYRDGNYQGTFTGDLDGPAGAFSLASPFEGDLTQVKLPQLALTAGQGKAAGS
VAVRFADTLAWDVDLQLSALDPAYWLAELPGTLAGPLRSKGELKGDALTLDAQLDLKGRL
RGQPAMLKAEAQGAGQSWTLGALAIQLGDNRINGSGSVQQRLAGQVDLDLPRLGQLWPRL
QGGVKGRLDVAGTLQAPQGTLTLQGQRLAQGENRLQQLDLDARLDNAQRGVVGLKATGIH
LGDTALGTLQANGKGDIRQQALTLALDGPQLKLDLGLDGQLNKGDWRGRLATGRIQAGGQ
DWQLQAPARLQRLASGQLDFGAHCWRSGQASLCGDDQRLAPEPRLRYHLKQFPLGSLAQW
LPKDFAWQGLLNADINLDIPASGPKGTVVVDASGGTLRVRDKGRWVDFPYQALRLDSTLA
PRRIDTRLAFRGERLGELNVNARLDPLGKNKPLSGDFRLAGLDLSVARPFVPMVERLAGQ
LNGSGRLSGTLLAPQVNGNLMLSGGEVSGAELPASLQDLSLQALIAGEQVQLNGNWRSGE
AGRGQLSGNLTWGQALGMDVRLQGQQLPVAVEPYATLEVAPDLTLRLIDDKLAVTGKVQV
PKGKITVRELPPSTVKVSDDTVIVGHQTEEGKPPMAMAMDIDVEVGRDKLSFSGFGLTAN
LLGHVHIGDNLDTRGELSLADGRYRAYGQRLTIRRARLLFAGPIDQPYLDIEAIRKVDDV
IAGIRLSGSAEQPTTKVFSEPAMSQEQALSYLVLGRPLGNTGEDNNMLAEAALGLGLAGS
AGITGSLASSLGIDDFQLDTEGSGNSTSVVASGNLTEKLSLRYGVGVFEPANTIALRYKL
SKKVYLEAASGLASSLDIFYKRDF
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacgcgtaatcaaatttacttcactgggcctgctggggggcgtcgcgagcatgggc
ctggtgctcggcttgctgctgggtacccaggccggcagccgctgggcactgggtaaggtg
cccgggcttgaagtggccgacttccagggtcgcctggcgggcagttggcaggccagccgg
ctgacctgggccgacggcggcagcacggtagagatgcaggcgccgtcgctggcctggtcg
cctgcttgcttgctgcgcgctagcttgtgcattgaccggttgcaggcagaccgcattgac
atggcctttgcgccaagcaccgaaccgaccgagagcgccccgctgcaattgccgaccctg
cgcttgccgctggccatcgaactgggtgaggtcaaggtcgggcagctgcgcctggatggc
agcgacctgcttggcgatttgcaactggctgcgcactggaccagcagcgggatacgcatc
gacagcctgcggctgctgcgcgacgacctgcaactgagcctgcagggtgacctgcaaccc
gaaggcgactggccggtaacactacaggcgcaattacagttgcctgcggtagacgaaaaa
ccctggcaactggcattgacggccaaaggccaattgcagaagacgctggagctcgccggc
accagcagtggttacctcgatgccacattgagcgggcagttgcaggcattggccgagcac
ctgccggcgaccttgcacatccgctccgaggcgttcaagccggctggtgcgttgcctgac
accctgcaattgaacgcgctcgagctcgatgccaagggcgatctgctcgatggctatcaa
ctgtctggcagggccagcctgccggccgagcagtcaccgatcgccttggtcctgtccggc
ctggtagacagtaaaggcgccaggctcgatgccctggacctgaccgccagcgacagccaa
cgggtcaagctgcaagccacggctgactggcagcaaggcctgagcgccgatgcgcagctg
gactggcaggacttcccgtggttgcgtctgtacccactggagacaccgcccgaggtcacc
ctcaagcgcttcaatacccaggtgcattatcgtgatggcaattaccaggggactttcacg
ggggacctggacggcccggcaggagcgttcagcctggccagcccgttcgaaggtgacctc
acccaggtgaaactgccgcagttggcgctgactgccggccagggcaaggcagccggcagt
gtcgccgtccgttttgccgacaccctggcctgggatgtcgacctgcagctctccgcgctc
gacccggcctattggctggccgagctgcccggtaccctggcggggccactgcgcagcaaa
ggcgaactgaaaggcgatgcacttaccctcgatgcccagcttgacctcaaaggccgcctg
cgtggccagccagccatgctcaaggccgaggcccaaggggcagggcaaagctggaccctg
ggcgcactggctatccagctgggtgacaaccgcatcaacggcagtggcagcgtgcaacag
cgcctggcggggcaagtcgaccttgacttgccgcgcctgggccagttgtggccaaggctg
caaggcggggtcaagggccggctggatgtcgccggcaccttgcaggccccgcaaggtacg
ctcaccctgcagggccagcgcttggcccagggcgaaaaccgcctgcagcagttggacctg
gatgcccgcctggacaacgcccaacgcggtgtagtcgggctcaaggcaaccggtatccac
ctgggtgataccgccttgggcacgttgcaggccaacggcaaaggcgacattcgccaacag
gccttgaccctcgcgctggatggcccgcagctcaagctcgaccttggcctggatggccag
ttgaacaaaggtgactggcgcggacgcttggccactggccgcatccaggccggtggccag
gactggcagttgcaggcgcccgcacgcctgcagcggctggccagcggccagcttgacttc
ggggcccactgctggcgctccggccaggcaagcctgtgtggcgacgaccagcggctggcc
cccgaaccgcgcctgcgctaccacctcaagcagttcccgctgggcagcctggcccagtgg
ctgccgaaggactttgcctggcaaggcctgctcaatgccgatatcaacctggacatcccg
gccagcggccccaagggcactgtcgttgtcgatgccagtggtggcaccttgcgcgtgcgc
gacaaaggccgttgggtcgatttcccttaccaggccctgcgcctggacagcacgctggca
ccgcggcgcatcgatacgcgcctggcgtttcgcggtgagcgcctgggtgagctgaacgtc
aacgcccggctcgatccgctgggcaagaacaaaccgttgtcgggtgatttccgactggcc
gggctggacctgtcggtggcccgcccattcgtgcccatggtcgaacgcctggccgggcag
ctcaatggcagtggtcggctttcaggcaccttgctggcacctcaggtcaacggcaacctg
atgctcagcggtggcgaagtcagtggcgccgagctgccggccagccttcaggacctgtca
ttgcaggcgctgattgccggcgagcaagtgcagctcaacggtaactggcgcagtggcgag
gcgggacgtggccagttgagcggcaacctcacctgggggcaggcgctgggcatggacgtg
cgtctgcaaggccagcaactgccggtcgcggtcgagccctacgccacactggaagttgcc
ccggacctgaccttgcgcctgatcgatgacaagctggcggtgaccggcaaggtgcaggtg
cccaagggcaagatcacagtacgagagctgccgccgtccacggtcaaggtgtcggatgac
acggtaatcgtcggtcaccagaccgaggaaggcaaaccacccatggcaatggccatggac
atcgatgtcgaagtcggccgcgacaagctgtcgttcagcggcttcgggctgactgccaac
ctgctgggtcatgtgcacatcggcgataacctcgatacccgtggcgaactgagcctggca
gacggccgctaccgtgcctacggccagcgcctcaccatacgccgggcgcgtctgctgttc
gccggcccgattgaccagccatacctggacatcgaagcgatccgcaaggttgacgatgtg
atagccggcatccgcctgagcggcagcgccgagcagccgacgaccaaagtgttctcggag
ccggccatgagccaggagcaggcgctttcgtacctggtattggggcggccattgggcaat
accggcgaagataacaacatgctcgccgaggcggccctgggcctgggccttgccgggagc
gccggcataaccggcagcctggcgtcgagcctggggatcgacgactttcagctggatacc
gaaggttctggcaacagcaccagcgtggtcgccagcggtaaccttaccgagaaactcagc
cttcgttacggggtgggcgtgttcgaaccggccaacacgatcgcgttgcgttacaagctg
agcaagaaggtttacctcgaggccgccagtgggctggcaagctctctggacatcttctac
aagcgcgacttctag
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