Pseudomonas sp. JY-Q: AA098_16150
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Entry
AA098_16150 CDS
T09824
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
psjy
Pseudomonas sp. JY-Q
Brite
KEGG Orthology (KO) [BR:
psjy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psjy03400
]
AA098_16150
Enzymes [BR:
psjy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
AA098_16150
DNA repair and recombination proteins [BR:
psjy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
AA098_16150
BRITE hierarchy
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
ANI34934
UniProt:
A0A173HGF9
LinkDB
All DBs
Position
complement(3564475..3566001)
Genome browser
AA seq
508 aa
AA seq
DB search
MRLGLVLGDQLSFDLASLASLDPARDAVLMAEVEGEARYVPHHPLKIILIFSAMRHFAQA
LRERGWQVHYVELDAEGNSGSIVGELRRWQQALGATHIHLTECGEWRLEQALRDAALPLV
WFRDTRFLCSREAFGRWATERRQLRMEHFYRGMRKRTGLLMEPDGSPAGGAWNFDGDNRK
PLPRQLRGPFAAHFAQDDITAAVVALVRQRFSDHYGGVDGFDYPVTHAEAQQLWQHFLDF
GLAAFGDYQDAMAEGEPYLFHARISAALNIGLLDVRRLCDDVDKAWREGRVPLNAAEGFI
RQLIGWREYVRGIYWQRMPAYAGLNHLNNDRALPEFYWTGHTRMRCMAQAIGQTLRLGYA
HHIQRLMVTGNFALLAGIVPTAICEWYLAVYMDAFEWVELPNTLGMVMHADGGYLGSKPY
CASGRYIQRMSDHCKACSYRVDQVTEEEACPFNALYWHFLIRHRPQLSANPRLALVYRSL
DGMPAGRRDAVWQRGQSLLARLDAGQAL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgggcctggtgctgggtgaccaactgtcgttcgacctggcaagtctggcgtcc
cttgaccctgctcgcgatgcggtcctgatggcggaagtggagggggaggcccgatacgta
ccgcatcatccgctgaagatcattctcatcttcagcgccatgcggcattttgcccaggcc
ctgcgtgaacggggttggcaggtgcactatgtcgagctggatgccgagggtaacagcggc
agcatcgtgggggagttgcgtcgatggcaacaagccttgggcgctacccacattcacttg
accgagtgcggtgagtggcgcctggagcaggccttgcgtgatgccgcactgccgcttgtg
tggtttcgcgacacgcgttttctgtgctcccgtgaagccttcgggcgctgggccacagaa
cgtcgccagctgcgtatggagcacttctaccgtggcatgcgcaagcgaaccggcctgctc
atggagcctgacggcagcccggcaggtggggcctggaatttcgatggcgacaatcgcaag
ccattgccacggcagctgcgtggcccgttcgctgcgcatttcgcgcaagacgacatcacg
gcagcggtggtggccttggtgcgtcagcgcttcagcgaccactacgggggcgtcgacggt
ttcgactaccccgtgacccacgccgaggcacaacagctgtggcagcattttctggatttc
ggcctggcggctttcggtgactaccaggatgcaatggccgaaggcgagccgtacctgttt
catgcgcgcatcagtgcggcgctcaacatcgggcttctggatgtgcgtcgtctgtgcgac
gacgtcgacaaagcctggcgcgaggggcgggtgccgctcaatgcagccgaaggcttcatt
cgccagttgatcggctggcgtgagtatgtgcgtggcatctattggcagcgcatgccggcg
tatgccgggctcaatcacctgaacaacgaccgggcgctgccagaattctactggaccggg
cacacccgcatgcgctgcatggcccaagccatcgggcagaccctgcggttgggctacgct
caccatatccagcggttgatggttaccggcaacttcgccttgctggccggtatcgtgcca
accgcaatttgtgagtggtacctggcggtctacatggatgccttcgagtgggtcgaactg
cccaacacgcttggcatggtgatgcacgccgatggcggctacctggggtccaagccgtac
tgcgccagtggtcgttatatccagcgcatgtccgatcattgcaaggcttgcagttacagg
gtcgaccaggtgaccgaagaggaggcctgcccgttcaatgccttgtattggcattttctc
attcgccatcgcccccagctctcggctaacccgcgcctggccctggtctatcgcagcctc
gatggcatgcccgctggccgtcgcgatgctgtgtggcaacgtggccagtcattgctggcg
cggctcgatgcggggcaggcgttatga
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