Pseudomonas sp. JY-Q: AA098_17525
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Entry
AA098_17525 CDS
T09824
Name
(GenBank) branched-chain amino acid ABC transporter substrate-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
psjy
Pseudomonas sp. JY-Q
Pathway
psjy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psjy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AA098_17525
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psjy02000
]
AA098_17525
Transporters [BR:
psjy02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AA098_17525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
RsgA_GTPase
AAA_29
MIT_C
AAA_22
DUF2158
Motif
Other DBs
NCBI-ProteinID:
ANI35202
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All DBs
Position
3858840..3859988
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AA seq
382 aa
AA seq
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MSAVIKDNAHGKTLVSLRGLNKHYGDFTAVDNLDLEIQDGEFLTFLGSSGSGKSTTLSML
AGFETPSSGEILVDGQSLVNVPPHKRDIGMVFQRYSLFPHLNVRDNIAFPLAIRKLNAAE
TSKRVEAMLKLVQLEKFAHRKPSQMSGGQQQRVAIARALVYEPRILLMDEPLGALDKKLR
EDLQDELRQLHRRLGITIVYVTHDQEEAMRLSQRIAIFSHGKIVGLGTGYDLYQNPPNAF
VASFLGNSNFLRIKASSNGAGSFEGQPVAIRLTPGLAAEQDALIMVRPEKALALTAEQAA
REPLPAGWNEVSAKVGEVLFLGESQTCHVVTAGGTELTVKALSAAGMPMQPGDSVKVRWA
VADACIYTEWAESDLSKSAGAH
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagtgatcaaagacaacgcgcacggcaaaaccctggtcagcctgcgcggcctg
aacaagcactacggcgacttcaccgccgtggacaacctcgacctggagatccaggacggc
gagttcctgaccttcctcggttccagcggctcgggcaagtccaccaccctgtcgatgctg
gccggcttcgaaacaccgagcagcggcgagatcctggtcgacggccagtcgctggtcaac
gtgccgccgcacaagcgtgacatcggcatggtgttccagcgctattcgctgttcccgcac
ctgaacgtgcgcgacaacatcgccttcccgctggccatccgcaagctcaatgctgccgaa
accagcaagcgcgtcgaggccatgctcaagctggtgcaactggagaagttcgcccaccgc
aagccgtcacagatgtctggcggccaacagcagcgcgtggcgattgcccgggcgctcgtg
tacgagccacgcatcctgctgatggacgagccgcttggcgcgctggacaagaagctgcgt
gaagacctgcaggacgaactgcgccagctgcaccgccgcctgggcattaccattgtctac
gtgacccacgaccaggaagaggcgatgcgcctgtcgcagcgcatcgccatcttcagccac
ggcaagatcgtcggcctgggcaccgggtacgacttgtaccagaatccgccgaatgccttt
gttgcgtcgttcctgggcaactccaacttcctgcggatcaaggccagcagcaatggcgca
ggcagcttcgagggccaaccagtggccatccgcctcaccccaggcctggccgccgagcag
gatgcgctgatcatggtgcgtccggaaaaagccctggccctgaccgccgaacaagcggcg
cgcgagccattgccggcgggctggaacgaggtcagtgccaaggtgggcgaagtgctgttc
ctgggtgaaagccagacctgtcatgtggtgactgcagggggtaccgagctgacggtgaag
gccctgtcggccgcgggcatgccgatgcagccgggcgacagcgtgaaggtgcgttgggca
gtggccgacgcttgcatttataccgaatgggccgagagcgacctgagcaagtcggccggg
gcacattaa
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