Pseudomonas sp. JY-Q: AA098_17585
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Entry
AA098_17585 CDS
T09824
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psjy
Pseudomonas sp. JY-Q
Brite
KEGG Orthology (KO) [BR:
psjy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psjy03032
]
AA098_17585
03400 DNA repair and recombination proteins [BR:
psjy03400
]
AA098_17585
Enzymes [BR:
psjy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AA098_17585
DNA replication proteins [BR:
psjy03032
]
Prokaryotic type
DNA Topoisomerases
AA098_17585
DNA repair and recombination proteins [BR:
psjy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AA098_17585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Metal_resist
Motif
Other DBs
NCBI-ProteinID:
ANI35214
LinkDB
All DBs
Position
3870562..3871584
Genome browser
AA seq
340 aa
AA seq
DB search
MLDCPLPRTLHYVDDSQPGLTRRRWRDRFIYLDADGQRVRDSDTLSRIAALVIPPAYTDV
WICADPQGHLQATGRDARGRKQYRYHAQWRELRDQHKYGRMLAFAQALPKLRTQLEAHLA
RPGLDREKVMALVVSLLDHTLIRIGNQRYLRDNRSYGLTTLRNRHVQVKGSTIRFQFRGK
RGVEHNVTLNDRRLANLLKRCMELPGQALFQYLDEDGQRHSVGSSEVNQFLQQLTGADFT
AKDYRTWAGSSLALNLLKPLAWEPESEAKRQVAAIVRQVATRLGNTPAVCRRCYIHPAVL
EHYALGRLANLPKNRVRKGLDPEEVALLLFLQALEEQEDH
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctcgactgccccctgccgcgcaccctgcattacgttgacgacagtcagccgggcctg
acccgtcggcgctggcgcgaccgtttcatctatctggatgccgatggccaacgggtacgt
gacagcgacaccctctcgcgcatcgccgcactggtgattcccccggcctacacggatgtg
tggatctgcgccgacccgcaaggccacctgcaagctaccggccgcgatgcccgcggccgc
aagcagtaccgctaccacgcacagtggcgcgaactgcgcgaccagcacaagtatgggcgc
atgcttgcgttcgcccaggccctgccaaagctgcgcacacagctggaagcccacctggcg
cggccagggctggaccgggaaaaggtcatggcactggtggtgagcctgctggatcacacc
ctgatccgcattggcaaccagcgctacctgcgcgataaccggtcgtacgggttgaccacc
ctgcgcaatcgccatgtgcaggtcaaaggcagcactatccgcttccagttccgcggcaag
cgcggcgtcgagcacaacgtcaccctcaacgaccggcgcctggccaacctgctaaaacgc
tgcatggaactgcctgggcaggcgctgtttcaatacctggatgaagacggccagcgccat
agtgtcggctccagcgaggtcaatcagtttctgcagcaactgaccggggccgacttcacc
gccaaggattatcgcacctgggccggcagcagcctggcattgaacctgctgaagcccttg
gcctgggagccggaaagtgaagccaaacgccaggtggccgcgatagtccgccaggtggcc
acacgcctgggcaatacaccggccgtgtgccggcgctgttacatccacccggcagtcctg
gagcactatgccttggggcgcctggccaatttaccgaaaaaccgtgtgcgcaaaggcctg
gacccggaggaagtggccttgctgctgtttcttcaggcactcgaggaacaggaggaccat
tga
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