Pseudomonas sp. JY-Q: AA098_19200
Help
Entry
AA098_19200 CDS
T09824
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
psjy
Pseudomonas sp. JY-Q
Pathway
psjy00020
Citrate cycle (TCA cycle)
psjy00190
Oxidative phosphorylation
psjy00650
Butanoate metabolism
psjy00720
Other carbon fixation pathways
psjy01100
Metabolic pathways
psjy01110
Biosynthesis of secondary metabolites
psjy01120
Microbial metabolism in diverse environments
psjy01200
Carbon metabolism
Module
psjy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
psjy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
psjy_M00149
Succinate dehydrogenase, prokaryotes
psjy_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
psjy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AA098_19200 (sdhB)
00650 Butanoate metabolism
AA098_19200 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
AA098_19200 (sdhB)
00720 Other carbon fixation pathways
AA098_19200 (sdhB)
Enzymes [BR:
psjy01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
AA098_19200 (sdhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_17
Fer4_10
Fer4_9
Fer4_7
Fer4_2
Fer4
Motif
Other DBs
NCBI-ProteinID:
ANI35513
LinkDB
All DBs
Position
complement(4270348..4271052)
Genome browser
AA seq
234 aa
AA seq
DB search
MLKVEVYRYNPDTDSAPKMESFDVDTGGKDLMVLDVLALIKEKDEGFSYRRSCREGVCGS
DGMNMNGKNGLACITPLSAVVKGGKLVLRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQN
DTPAPAIERLQSPEDRDKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLAD
SRDTKTQERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQSGT
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaagtcgaagtttatcgttacaacccggacaccgactcggcgccaaaaatggag
tcgttcgacgtcgataccggcggcaaggacctgatggtgctggatgtattggcactgatc
aaggaaaaggacgagggtttctcgtaccgtcgctcctgccgtgaaggcgtttgcggttcc
gacggcatgaacatgaacggcaagaacggcctggcctgcatcaccccgctgtcggcggtg
gtgaagggcggcaagctggttctgcgtcctctgccaggcctgccggtcattcgtgacctg
gtggtcgatatgagcatcttctacaagcagtacgagaaggtgaagccgttcctgcagaac
gacaccccggccccggccatcgagcgcctgcagtcgccggaagaccgtgacaagctggac
ggcctgtacgagtgcatcctgtgcgcgtgctgctcgacttcctgcccgtcgttctggtgg
aacccggacaagttcctgggcccggcagccttgctgcaagcctaccgcttccttgccgac
agccgcgataccaagactcaggagcgcctggcgtccctggatgacccgttcagcgtattc
cgctgccgcgggatcatgaactgcgtaaacgtttgcccgaaaggtctgaacccgaccaag
gcaatcggtcacgtacgtaacatgctgctgcaaagcggcacctga
DBGET
integrated database retrieval system