Pseudomonas sp. JY-Q: AA098_21030
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Entry
AA098_21030 CDS
T09824
Symbol
ruvB
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
psjy
Pseudomonas sp. JY-Q
Pathway
psjy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psjy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AA098_21030 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psjy03400
]
AA098_21030 (ruvB)
Enzymes [BR:
psjy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AA098_21030 (ruvB)
DNA repair and recombination proteins [BR:
psjy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AA098_21030 (ruvB)
RecFOR pathway proteins
AA098_21030 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
AAA_3
AAA_16
nSTAND3
Mg_chelatase
AAA_14
AAA_17
TIP49
AAA_2
RNA_helicase
ABC_tran
Rad17
AAA_28
AAA_18
NTPase_1
NB-ARC
AAA_24
TsaE
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ANI35856
LinkDB
All DBs
Position
complement(4656638..4657684)
Genome browser
AA seq
348 aa
AA seq
DB search
MIEADRLIAASGRDREEVQDRAIRPLSLDEYIGQPVVREQMALFIQAARGRGESLDHTLI
FGPPGLGKTTLANIIAHEMGVSVKSTSGPILERPGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQR
LEFYNDKDLSTIVSRSANILGLAIEDQGAYEIARRARGTPRIANRLLRRVRDYAEVRGKG
QITKAVADMALNLLDVDERGFDHSDRRLLLTMIEKFDGGPVGVDNLAAAISEERHTIEDV
LEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIPGRLGEGGDFSEPGDE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaagccgaccgcctgatcgccgccagtggccgcgaccgcgaagaagtccaggac
cgtgcgattcgcccgctgagcctggacgagtacattggccagccggtggtgcgcgagcag
atggcgctgttcatccaggccgcccgcggccgcggcgaatcgcttgaccacacgctgatc
ttcggcccgcccggcctgggcaagaccaccctggccaacatcatcgcccatgaaatgggc
gtgtcggtgaagagcacttcggggccgattctcgagcgccctggcgacctggcagccatg
ctgaccaacctcgagccgcacgacgtgctgttcatcgacgaaatccaccggctgtcgcct
gtggtcgaagaagtgctttacccggccatggaggacttccagctcgacatcatgatcggc
gaaggcccggcagcccgttctatcaagctcgatctgccacccttcaccctggtgggggct
actacccgtgccggcatgctgaccaacccgctgcgtgaccgcttcggtatcgtgcagcgc
ctggagttctacaacgacaaggatctgagcaccattgtcagccgctcggccaacatcctt
ggcctggccatcgaagaccagggggcctacgagatcgcccgtcgtgcccgtggcacgccg
cgcatcgccaaccgcctgctgcgccgcgtgcgtgactacgccgaggtgcgcggcaagggc
cagatcaccaaggccgtggctgacatggcgctgaacctgctggatgtcgacgagcgtggt
ttcgaccattcggaccgtcgcctgctgctgaccatgatcgagaagttcgacggcggcccg
gtgggcgtggacaacctggctgcagccatcagcgaagagcgtcataccatcgaagatgtg
cttgagccgtacctgattcagcagggctacatcatgcgcacgccacgcggccgcgtggtc
acccggcatgcctacctgcactttgggctgaatattcccgggcgcttgggggaggggggc
gatttttccgagccaggcgatgaatga
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