Pseudomonas sp. JY-Q: AA098_21135
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Entry
AA098_21135 CDS
T09824
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
psjy
Pseudomonas sp. JY-Q
Brite
KEGG Orthology (KO) [BR:
psjy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psjy03009
]
AA098_21135 (rimO)
Enzymes [BR:
psjy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AA098_21135 (rimO)
Ribosome biogenesis [BR:
psjy03009
]
Prokaryotic type
ribosomal protein modification factors
AA098_21135 (rimO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Matrix_Paramyxo_N
Moricin
Motif
Other DBs
NCBI-ProteinID:
ANI35874
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Position
4677984..4679315
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AA seq
443 aa
AA seq
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MSTTPATPKVGFVSLGCPKALVDSERILTQLRMEGYEVVPTYEDADVVVVNTCGFIDSAK
AESLEVIGEAIKENGKVIVTGCMGVEEGSIRDVHPSVLSVTGPQQYEQVVNAVHEVVPPR
QDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGEVLSEAE
RLVKAGVKEILVISQDTSAYGVDVKYKTDFWNGRPVKTRMLELCEALSSLGAWVRLHYVY
PYPNVDDVIPLMAAGKILPYLDIPFQHASPKVLKSMKRPAFEDRTLARIKNWREQCPELV
IRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLAEVPDDVKQE
RWDRFMAHQQAISAARLQLRIGKEIDVLIDEVEEQGSVGRSFFDAPEIDGSVFIDGDHGF
KPGDKVRCRVVDADEYDMWAEPI
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccacgcccgccacccccaaggtaggtttcgtaagcctgggttgcccaaaagcc
ctggtcgactccgagcgcatcctgacccagctgcgcatggaaggctatgaagtcgtaccc
acctacgaggacgccgacgtggtggtggtcaacacctgcggcttcatcgacagcgccaag
gccgaatcgctggaagtgatcggcgaagccatcaaggaaaacggcaaggtgatcgtcacc
ggctgcatgggcgtcgaagaaggcagcatccgtgacgtgcacccaagcgtgctgtcggtc
actggcccgcagcagtacgagcaggtagtcaacgccgttcacgaagtggtgccgccgcgt
caggaccacaacccgctgatcgacctggtgccgccacagggcgtcaagctgaccccgcgc
cactatgcctacctgaagatctccgaaggctgcaaccacagctgcagcttctgcatcatc
ccgtcgatgcgcggcaagctggtcagccgcccggtgggtgaagtgctgagcgaggccgag
cgcctggtcaaggccggggtgaaggaaatcctggtgatttcccaggacaccagcgcctac
ggcgtcgacgtcaagtacaagaccgacttctggaacggccgcccggtgaagacccgcatg
ctcgagctgtgcgaagcactgagcagcctgggcgcctgggtacgcctgcactatgtgtac
ccttacccgaacgttgacgacgtgatcccgctgatggctgccggcaagatcctgccgtac
ctggacatcccgttccagcacgccagcccgaaagtgctcaagtcgatgaagcgcccggcc
ttcgaagaccgcaccctggcgcgcatcaagaactggcgcgagcagtgccctgagctggtg
atccgctccaccttcatcgtcggcttcccgggcgagaccgaggaagacttccagtacctg
ctggactggctgaccgaagcccagctcgaccgcgtgggctgcttccagtactcgccggtg
gaaggcgccccggccaacgacctgggcctggccgaagtaccggacgacgtcaagcaagag
cgctgggaccgcttcatggcccaccagcaggccatcagtgctgcccgcctgcaattgcgc
atcggcaaggaaatcgacgtgctgatcgacgaagtcgaggaacaaggttcggttggccgc
agcttcttcgatgcaccggaaatcgatggcagcgtgttcatcgatggcgaccatggtttc
aagccaggcgacaaagtgcgttgccgtgtggtggatgccgacgagtacgacatgtgggct
gaacccatctaa
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