Pseudomonas sp. JY-Q: AA098_22120 Help Entry AA098_22120       CDS       T09824                                  Name (GenBank) ATP-dependent DNA helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism psjy  Pseudomonas sp. JY-Q Brite KEGG Orthology (KO) [BR:psjy00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:psjy03400]     AA098_22120 Enzymes [BR:psjy01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      AA098_22120     5.6.2.6  RNA 3'-5' helicase      AA098_22120 DNA repair and recombination proteins [BR:psjy03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     AA098_22120 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc DEAD WH4_Lhr WH_Lhr Helicase_C WH3_Lhr ResIII Cas3-like_C_2 AlkZ-like DprA_WH Motif Other DBs NCBI-ProteinID:  ANI36051 LinkDB All DBs Position 4917987..4922267 Genome browser AA seq 1426 aa AA seqDB search MNLPAKHHPVLELFHPAVSTWFRRRFATVTDAQAQAWPLIHAGQSMLLAAPTGSGKTLSA FLAVLDELLREGMKHQGELPAQTLVIYVSPLKALSNDIRLNLQAPLEGISQAIAEQGLNA PRITTAVRTGDTPQKERAAMRKLAPHILVTTPESLYVLMGSASGREGLAYVHTVIVDEIH ALAGNKRGAHLALTLERLQALCKKPLRRIGLSATQRPVERVAQFLVGSGRPCDIVDIGHA RKRDLAIEVPPVPLGAVMATDVWGLVYDRLATLAREHRTTLVFVNTRRLAERITRHLSDR LGKEAVAAHHGSLSKALRLDAEQRLKSGQLQVLVATASLELGIDIGDIDLVCQIASPGSI AGFLQRVGRAGHQVDGVPKGRLFPTSRDDLIECVALLDCVRQGELDALHIPRAPLDVLAQ QIVAEASNQAWHEQDLLDCLRQATPYAELDQHHYQALLRMLAEGYNGRQGVRSAYLHRDA VSGTLRGRRGSQLTALTSGGTIPDNADYAVLLEPQALNIGSVNEDFAVESIAGDIFQLGN ASYRILRVEPGRVRVEDAHGLPPTIPFWLGEAPGRSDELSAAVARLQARIDQQLAQAGGD TVEVLAWLQATFELDEACAGQLLDYLARTREVLGALPSQDTLVMERFFDESGGTQLIIHS PYGSRINRAWGLALRKRFCRTFNFELQAAASEDAIVLSLSTSHSFELDEVWRYLNSRSAE PILIQALLDAPLFGVRWRWNAGVAMALPRFVGGRKVAPQIQRMKSEDLVAAVFPDQIACL ENIVGERQIPDHPLVEQTLDDCLHEAMDSEGWLALLRRMESGAVRLLCRDLPAPSPLASA ILNARPYAFLDDAPLEERRTQAVLNRRWNDVHSSDDLGALDADAIAAVAAEAWPQPANPD EMHEALMSLGAIGQVEVDANPCWDVLLRQLAKAGRALRLPDDKLWLARERLNLLLALYPT AHREPALERLAGFDQPIEPDNTLSELLRARLSGHGPQTLAQIAAPLGKPVTDIEQALARL EAEGYVLRGHFSPGATDLQWCERHLLARIHRYTVKRLRREIEPVSLQDFMRFLFDWQHLA PDERLRGPQAVAEVLGQLQGFPSAAAAWEAELLPARIKDYSPHWLDEACRSGQFAWSRLA ATVASSTLTSTPLVLLPRDQLNTWRSLAPAPAVDALGLRAQRVHEALKTQGALFFDELAH EAHLLPSELETALQELVGSGLAGADSFTGLRSLITPATKRSSRNSRRGHPPLSSSMAHAG RWALLRRSDAPPDHDQRLEHIARTLLRRYGVICWRLLARESDVLPPWRELLRCYHRLEAR GEIRGGRFIAGLAGEQFAVPEAVVLLRQVRRREPDGTLQVVSAGDPLNLIGSLLPGAKVP AVIGNRLLYRDGIPVAVRMAGRYAYLVEASAQEQESWRQKLLRDPL NT seq 4281 nt NT seq  +upstreamnt  +downstreamnt atgaacctgcccgccaaacaccacccggtgctcgagctgttccaccctgccgtcagcacc tggttccgccgccgcttcgccacggtcaccgatgcccaggcacaggcctggccgttgatc cacgccgggcaatccatgctgctggccgcgccgaccggctcaggcaagaccctgagcgct tttctggccgtgctagatgagctgctgcgtgaaggcatgaagcaccagggtgaactgccc gcacagacactggtgatctacgtttcacctctgaaggccctgtccaatgacattcgtctg aacctgcaggccccgctcgaaggcatcagccaagccattgcagagcaaggcctgaacgcc ccacgcatcaccacggcggtacgcaccggcgatactccgcagaaggaacgcgccgccatg cgcaagctggccccgcacattctggtgacgacccccgaatcgctttacgtgctgatgggc tcggcgtctggccgtgaaggcctggcctatgtgcacacggtaatcgtcgacgaaatccat gccttggccggtaacaagcgtggcgcccatctggccctgaccttggagcgcctgcaagcc ttgtgcaaaaagccactgcggcggatcggcctgtccgctacccaacgcccggtcgaacgg gtggcgcagtttctggtgggtagcgggcgcccctgcgacattgtcgatatcggccatgcc cgcaagcgtgacctggccatcgaagtgccgccggtaccgttgggggcggtgatggccact gatgtctggggcctggtgtatgaccgcttggccacccttgcccgtgaacaccgcaccacg ctggtattcgtcaatacccggcgcctggccgaacgtatcacccgccacctcagcgaccgg ctgggcaaggaggcggttgccgcacaccatggcagcctgtccaaagcgctgcgcctggat gcggagcagcggctcaagagcggccagctccaggtgctggtcgcgaccgcatcgctggag cttggcattgatatcggcgatatcgacctggtctgccagatcgcctcgccgggctcgatt gccggcttcctgcaacgggttggccgcgctggacaccaggtcgatggtgtgccgaagggg cgcctgttccccacctcacgcgatgacctgatcgaatgcgttgccttgcttgactgcgtt cgacagggcgaactggacgcactgcacatcccccgggcaccgctggatgtgctggcccag cagatcgtcgcagaagccagcaaccaggcctggcacgaacaggatctgctggattgcctg cgccaggccacaccttacgccgagcttgaccagcaccattaccaggccctgctgcgcatg ctcgccgagggctacaacggccgccagggtgtgcgcagtgcctacttgcaccgtgacgca gtgagcggcacgctgcgtggccgacgtggcagccaactgaccgcgctgaccagcggcggc accatccccgacaacgccgactacgccgtgttgctggaaccgcaggcgctgaacatcggc agcgtcaatgaagactttgccgtggaaagcattgccggcgatattttccagctgggcaac gcctcctatcgcattctgcgcgtcgagccgggccgggtgcgggtagaggatgctcatggc ctgccaccgaccattccgttctggctgggtgaagcgccggggcgcagtgacgagctgtct gccgccgtggcccggctgcaggcgcgaatcgaccagcaactggcgcaggcaggcggcgac acggtggaggtactggcctggttgcaggcgaccttcgaactggacgaagcttgtgcgggc cagttgctcgactacctggcccgcacccgtgaagtgcttggcgccctgccctcgcaggat acgctggtgatggaacgttttttcgatgagtccggcgggacccaactgatcattcattca ccctacggtagccgcatcaaccgcgcctggggcctggccctgcgcaagcgcttctgccgc accttcaacttcgaactgcaggctgccgccagcgaggacgccatcgtgctgtctctgtcg accagccacagtttcgagctggacgaagtgtggcgttacctgaacagccgcagcgccgag ccgattctcatccaggccctgctcgatgcaccgctgtttggcgtgcgctggcgctggaat gcaggcgtggccatggcactaccgcgctttgtgggcggacgcaaggtggcgccacaaatc cagcgcatgaagagtgaggacctggttgccgctgtgttccccgaccagatcgcctgcctg gaaaacatcgtcggcgagcggcagattcccgaccatccgctggtcgagcaaaccctcgac gactgcctgcacgaggcgatggacagcgaaggctggctggccctgctgcggcgcatggaa agcggtgcagtgcgcttgctgtgcagggatttgcccgccccctcgccgctggcttcagcg attctcaatgcccggccttatgcctttctggacgatgcgccactggaagaacgacgtacc caggcggtactcaaccggcgctggaacgacgtgcacagtagcgacgacctgggcgcgctg gacgctgatgccattgctgccgtagcggccgaggcctggccacagccggccaatcccgac gaaatgcacgaagcattgatgagcctgggtgccatcggtcaggtcgaggtagatgccaac ccctgctgggatgtgctgctaaggcagctggccaaggccgggcgtgccttgcgcctgccc gatgacaagctctggttggcccgcgaacgcctgaacctgctgctggcactgtaccccaca gcgcacagggagccagcgctcgaacggctcgctggcttcgaccagcccatcgagcccgac aacacactgagcgaactgctgcgcgcccgcctgagcggccatggcccacagaccctggcg caaatcgctgcgccattgggcaaaccggtaaccgatatcgaacaggcgctggcccgcctg gaagccgaaggctatgtgctgcgcgggcatttcagcccaggtgccactgacctgcaatgg tgcgaacgccacttgctggcgcgcatccaccgctacacggtcaaacgcctgcgccgcgag atcgaaccggtcagcctgcaagacttcatgcgctttctgttcgattggcagcacctggcg cctgacgagcgcctgcgtggtccgcaggcggtggccgaagtgctgggccagttacaagga ttccccagcgccgcagcggcctgggaggcggagctgctgccggcgcgtatcaaagactac agtccgcactggctcgacgaagcctgccgaagcggccagtttgcctggagccggctggcg gcaacagtggcgagcagcacgttgaccagtaccccactggtgttgctgccgcgggaccag ttgaacacgtggcgcagcctggcgcccgcacctgctgtcgacgcccttggcctacgtgcg caacgtgtgcacgaagcgctgaaaacccagggtgcgctgttcttcgatgaactggcacat gaggcacacctgctgcccagtgaactggaaactgcactgcaggagctggtgggctcgggc ctggccggggcggacagtttcactggcttgcgcagcctgatcacgcctgcaaccaagcgc agctcacgtaacagccgccgaggccacccgccgctttccagcagcatggcgcatgccgga cgttgggccctgctgcgccgcagcgatgcgccaccggatcacgaccagcgcctggagcac attgcccgcacgctgctgcgccgctatggcgtgatctgctggcggctgttggcgcgcgag agtgatgtactgccgccctggcgtgagctgctgcgctgctatcaccgattggaagcgcgt ggcgagatccggggcgggcgcttcattgccgggctggccggtgaacagttcgccgtgcct gaggcggtagtattgctgcggcaggtgagacgacgtgaaccggacggaacgctgcaggtg gtgagcgccggtgacccgctgaacctgatcggctcgttgctgcccggggcgaaagtgccg gcagtgattggcaaccggcttctgtatcgcgacggaataccggtggcggtgcggatggcc gggcgttacgcgtatctggtcgaggcgtccgcacaggagcaggaaagctggcggcaaaaa ctgctgcgcgaccccctgtag

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