Pseudomonas sp. JY-Q: AA098_25980
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Entry
AA098_25980 CDS
T09824
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psjy
Pseudomonas sp. JY-Q
Pathway
psjy00260
Glycine, serine and threonine metabolism
psjy00460
Cyanoamino acid metabolism
psjy00630
Glyoxylate and dicarboxylate metabolism
psjy00670
One carbon pool by folate
psjy00680
Methane metabolism
psjy01100
Metabolic pathways
psjy01110
Biosynthesis of secondary metabolites
psjy01120
Microbial metabolism in diverse environments
psjy01200
Carbon metabolism
psjy01230
Biosynthesis of amino acids
psjy01240
Biosynthesis of cofactors
psjy04981
Folate transport and metabolism
Module
psjy_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psjy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AA098_25980 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AA098_25980 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AA098_25980 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AA098_25980 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AA098_25980 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AA098_25980 (glyA)
Enzymes [BR:
psjy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AA098_25980 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ANI36771
LinkDB
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Position
complement(5775930..5777183)
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AA seq
417 aa
AA seq
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MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANGAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTNTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNAAVFPGAQGGPLMHVIAAKAVCFKEALEPGFKAYQQQVIENAQAMAQ
VFIDRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVAQCVALAGWICDILDNLGDADVEADVAKNVAALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccagggttacgacgatgcactgctggcggcgatgaat
gccgaagaacagcgccaggaagatcacatcgagctgatcgcctcggagaactacaccagc
aagcgcgtcatgcaggcccaaggcagcggcctgaccaacaagtacgctgaaggctaccct
ggcaagcgttactacggtggctgcgagcacgtagacaaggtagaagccctggccatcgag
cgcgccaagcagctgttcggtgccgactacgcaaacgtccagccacactccggctcgtcg
gccaacggcgccgtctacctggccctgctgcaagccggtgacaccatcctgggcatgagc
ctggcccacggtggccacctgacccacggcgccaaagtgtcgtcctcgggcaagctgtac
aacgctgtccagtacggcatcgacaccaacaccggcctgatcgactatgacgaagtcgag
cgcctggcggtcgagcacaagccgaaaatgatcgttgccggtttctcggcctactccaag
accctcgacttcccacgcttccgcgccatcgccgacaaagtgggcgcactgctgttcgtc
gacatggcccacgttgccggcctggttgccgctggcctgtacccgaacccgatcccgttc
gccgatgtggtcaccaccaccacccacaagaccctgcgcggtccgcgtggcggcctgatc
ctggccaagtcgaacgaagagatcgagaaaaagctgaacgccgctgtattcccgggtgcc
cagggtggcccgctgatgcacgtgatcgctgccaaggcggtgtgcttcaaggaagcgctg
gagcctggattcaaggcctaccagcagcaagtgatcgaaaacgcccaggccatggcccag
gtgttcatcgaccgtggctacgatgtggtttccggtggcaccgacaaccacctgttcctg
gtcagcctgatccgtcagggcctgactggcaaagacgccgacgccgccctgggtcgtgcg
catatcaccgtcaacaagaacgccgtgccgaacgacccgcagtcgccgttcgtcacgtcg
ggcctgcgtatcggcaccccggccgtcaccacccgcggcttcaaggtcgcccagtgcgtg
gccctggctggctggatttgcgacatcctcgacaacctcggtgacgcagacgtcgaagcc
gatgtggcgaagaacgtcgcggccctgtgcgcagatttccctgtctaccgctga
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