KEGG   Pseudomonas gorinensis: U771_00615
Entry
U771_00615        CDS       T02969                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
psk  Pseudomonas gorinensis
Pathway
psk03030  DNA replication
psk03410  Base excision repair
psk03420  Nucleotide excision repair
psk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    U771_00615
   03410 Base excision repair
    U771_00615
   03420 Nucleotide excision repair
    U771_00615
   03440 Homologous recombination
    U771_00615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psk03032]
    U771_00615
   03400 DNA repair and recombination proteins [BR:psk03400]
    U771_00615
Enzymes [BR:psk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     U771_00615
DNA replication proteins [BR:psk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     U771_00615
DNA repair and recombination proteins [BR:psk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     U771_00615
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     U771_00615
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 Obc1_cap
Other DBs
NCBI-ProteinID: AHC32691
LinkDB
Position
123618..126392
AA seq 924 aa
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDDMYAQYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSAMDVEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLKELYEQLDIVPTLPIRGAKTLPAKLLEHKEM
AFLSYQLATIKIDVPLDVGLDDLHLIEPDREKLLELYTLLEFKSWFDEVQRDAKRSGLEV
AAPVVENAPLVDTALKYETILDQARFDVWLKKLGDAKLFAFDTETTGIDAQQAQLVGLSF
AVQPYEAAYIPLTHSYMGVPEQLDRDTVLRALKPILEDPSKLKVGQHAKFDMNILANCAI
GGDQACGISVQGIAYDTMLESYVLDSTATRHDMDSLAQKYLGHTTVSFQDIAGKGAKQLT
FDQISLEQAGPYAAEDADVTLRLHQTLHEKLLAIPSLASVLTDIEMPLVPVLARIERQGA
LVDAKLLGVQSVELGNKMVELEREAFAIAGEEFNLGSPKQLGAILYEKLGHPVLSKTAKG
QASTAEAVLAELADQDFPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAVA
ATGRLSSSDPNLQNIPIRTAEGRRIRQAFIAPKGYKLLAADYSQIELRIMAHLAKDEGLL
HAFRNDLDVHKATAAEVFGVALDAVTTDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQS
QAYIDRYFARYPGVLAYMERTRAQAAEQGYVETIFGRRLYLPDINAKNPALRKGAERTAI
NAPMQGTAADIIKKAMVAVDHWLAESGLDAKVILQVHDELVLEVREDLVDTVREEIRQHM
SQAVTLDVPLLVEVGVGDNWDEAH
NT seq 2775 nt   +upstreamnt  +downstreamnt
atgagccaagcacccctcgtcctggtggacggttcttcttatctgtaccgcgccttccat
gcgctgccaccgctgaccacctccaaaggcctgccgaccggtgcggtcaagggcgtgttg
aacatgctcaagagcctgcgcaagcagtacccggacagcccgttcgcggtggtgttcgac
gccaagggtgggacctttcgcgacgatatgtacgcgcagtacaaggccaaccgtccgagc
atgcccgatgacatgcgcttgcagatcgagccgctgcaccagagcgtgatcgccctgggc
ttccctttgctgtgcgtcgaaggcgtcgaggccgatgatgtcatcggcaccctggcccgc
agcagcgcggccgctgaccgcccggtggtgatttcgaccggtgacaaggacatggcgcaa
ctggtggacgggcacattaccttggtcaacaccatgaccggtagcgccatggatgtggag
ggcgtaaaggagaaatttggcgtcgctccggagcagatcatcgactatctggcgctgatg
ggcgactcgtccgacaacattccaggggttccaggcattggtcccaaaaccgcctctggc
ttgttggtgggcgttaatggcggcctgaaagagttgtacgagcaactggatatcgtgcca
accctgcccatccgcggtgccaagacgctgccggccaagctgctggagcataaggagatg
gcgttcctgtcctaccagctggcaaccatcaagatcgatgtaccgctggatgtgggcttg
gatgacctgcacctgatcgagccggatcgcgagaagctcctggagttgtacaccctcctg
gagttcaagagctggttcgacgaagtgcaacgcgacgccaagcgctctgggctggaggtg
gcggctccggttgtggagaatgcgccgctcgtcgataccgcactaaagtacgaaaccatc
ctcgaccaggcgcgttttgacgtgtggttgaagaagctcggcgacgccaagttgtttgcc
ttcgacaccgagaccactggcattgatgcccagcaggcgcaattggtggggttgtcgttt
gcagtccagccctatgaggccgcctatatcccgctgacccattcctacatgggcgtaccg
gagcaactggaccgtgacacggtgctgcgcgcactcaagccgattctcgaagacccgagc
aagctcaaggtcggccagcacgccaagttcgacatgaacatcctggccaactgcgctatc
ggcggtgatcaggcatgcggcatctcggtgcagggcattgcctacgacactatgctcgag
tcctacgtcctggattccaccgccacccgccatgatatggacagcctggctcagaaatac
ctgggccacaccaccgtcagcttccaggatatcgccggcaaaggcgccaaacagctgact
tttgaccagatctccctcgaacaagccggcccatatgccgcagaagatgctgacgtgacc
ttgcgcctgcatcagaccctgcatgaaaaactcctggctatcccaagcctggcctcggtg
ctgacggatatcgaaatgccgttggtgccggtgttggcgcgtatcgaacgccagggtgcg
cttgtggatgccaagctcctcggtgtgcagagcgttgagctggggaacaagatggtcgag
ttggagcgtgaggcatttgccatcgcgggtgaggaattcaaccttggctcacccaagcaa
ttgggcgcgatcctctacgaaaaactcggccacccggtgctcagcaagaccgccaagggc
caggcgtcgaccgccgaagcggtgctcgccgagttggccgaccaggatttcccgttgccc
aaggtgctgatgcaataccgctcgatgagcaagctcaaaagcacctacaccgaccgcctg
ccagagcagatcaacccgcgcaccgggcgtattcacacgtcttatcaccaagcggtggcg
gcaaccgggcgtttgtcgtccagtgacccgaacttgcagaacattccgatccgcaccgcc
gaaggccggcggattcgccaggcgttcatcgcgcccaaaggctacaagttgctggcggcg
gactactcgcagatcgaactgcggatcatggcgcacctggccaaggatgaaggcctgctg
catgctttccgtaatgacctggatgtgcacaaggctaccgctgccgaagtattcggggtg
gcgttggatgcggtgaccaccgaccagcggcgcagcgccaaggcgatcaacttcggcctg
atctacggcatgagcgcgtttggcctggccaagcagatcggcgtcgaccgcaagcaatcc
caggcgtatatcgaccgctacttcgcccgctaccctggcgtgctggcttatatggaacgc
acccgcgcccaggcggccgagcagggatacgtcgagaccatttttggtcgtcgcctgtac
ctgccggacatcaacgcgaagaacccggcgctgcgcaagggggccgaacggacggcgatc
aacgcaccgatgcagggcacggcggcggacatcatcaagaaagccatggtggcggtggat
cactggctggccgagtcgggcctggacgccaaagtcatcctgcaggtgcacgatgaattg
gtgctggaggtccgcgaagacttggtcgatacagtgcgtgaggagattcgtcagcacatg
agccaggccgtgacactggatgtgcccttgctggtggaagtgggtgtgggcgacaactgg
gacgaagcccactga

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