Pseudomonas gorinensis: U771_01625
Help
Entry
U771_01625 CDS
T02969
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psk
Pseudomonas gorinensis
Pathway
psk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U771_01625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psk03019
]
U771_01625
03400 DNA repair and recombination proteins [BR:
psk03400
]
U771_01625
Enzymes [BR:
psk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U771_01625
Messenger RNA biogenesis [BR:
psk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
U771_01625
DNA repair and recombination proteins [BR:
psk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
U771_01625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AHC32886
LinkDB
All DBs
Position
362018..363955
Genome browser
AA seq
645 aa
AA seq
DB search
MHDTLQQVFGYPQFRSGQEETVSAVLAGRSAAAIFPTGSGKSLCYQLSAVLLPHLTLVVS
PLLALMQDQLGFLQRHGISAGSIDSAQSRDDANDVMARARSGELKILMISVERLKNERFR
NFLQSVPISLLVVDEAHCISEWGHNFRPDYLKLPDYQRQFNIPQALLLTATATPKVIADM
QAKFAIAPGDVVTTGFYRPNLNLLVEPVAGADKRRRLVQWMGERANQPSIVYVTLQKTAE
QIAEHLNRNGIQAEAYHAGLPHDKREGIQQRFMEGRSNCIVATIAFGMGIDKSDIRNVVH
FDLPKSIENYSQEIGRAGRDGQPSDCLVLANRDSLNVLENFVYGDTPEQEGIRRVLEELQ
AVHSDGQWEFLLRSLSDHSNIRELPLKTLLVQLELKGVIAPRYAFYAEYRFKYLIEPDAL
LARFSGERQQFVAAIVQVCKRAKTWATVDFDALYQQHNAERNRVVKALDYFQEQGLIELE
SKQMTEVYSLLNTDFDPQALSAELYTGFKQHEVGEVARIHAMLDLFATDHCLGQRLAQYF
GDENAPQRCGHCSVCHGHVAHLPAPSSLPPLVDKNFMGLCGDFIHRHHEHTGHLPGAERL
TRFLGGISVPLFTKLKARGIPGFAALEDYPYAEVREWAAAHLNDL
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacaccctccagcaggtctttggttatccacagtttcgttcgggccaggaagaa
accgtcagcgccgtactggccgggcgttcggccgcggcgattttccctaccgggtcggga
aagtccctgtgttaccagctgtcggcggtattgctgccgcacctgacgttggtagtgtcg
ccgttgctggcgctgatgcaggaccaattggggttcctgcaacgccatggcatttcggcc
ggcagtatcgattcggcccagagccgcgatgacgccaacgatgtgatggcgcgtgcgcgt
tcgggcgagttgaaaatcctgatgatttccgtggagcgtttgaagaacgagcgctttcgc
aactttctgcaaagcgtgccgatctcgttgctggtggtggacgaagcgcactgtatttcc
gaatggggtcacaactttcgtccggactatctgaagctgccggactaccagcgccagttc
aatatcccacaagcgctgctgttgactgccacggccacgcccaaggtgattgccgacatg
caggccaagttcgccattgccccaggcgacgtggtcaccacaggcttctaccggcccaac
ctcaacctgctggtggagccggtagcgggcgcagacaagcgtcggcggttggtgcagtgg
atgggcgaacgcgccaaccagccgagcatcgtctacgtcaccttgcagaaaaccgccgag
cagattgccgagcacctgaaccgcaacggcatccaggccgaggcgtatcacgcgggtttg
ccccacgataagcgcgagggcatccaacagcgcttcatggaggggcgctccaattgcatc
gtcgccactattgcgtttggcatgggaatcgacaagagcgacattcgcaatgtggtgcac
ttcgacctgcccaagtccatcgagaactacagccaggaaatcggccgtgcggggcgcgat
gggcagccgtccgattgcctggtactggccaaccgcgacagcctcaatgtgctggagaac
tttgtgtatggcgacacgcccgagcaggaagggattcgccgtgtactggaagagttgcag
gcggtgcacagcgatgggcagtgggagttcctgctgcgttcgctgtcggaccacagcaac
atccgcgagctgccgctcaagacgttgctggtccagctggagctcaagggcgtgatcgcc
ccgcgctatgcgttttatgccgagtaccgcttcaagtacctgatagagcccgacgccttg
ctggcgcgtttttccggcgagcgccagcagtttgtcgcggcgatcgtccaggtgtgcaaa
cgtgcgaaaacctgggcgacggtggatttcgacgcgctgtatcaacagcacaatgccgag
cgcaatcgggtggtgaaggcgctggattacttccaggaacagggcctgatcgagctggaa
agcaagcagatgactgaggtctatagcctgctcaataccgactttgatccacaggcactg
agtgctgagttatacacaggcttcaagcagcacgaggtgggagaagttgcacggattcac
gccatgctcgacctgtttgccaccgatcattgcctggggcaacgcctcgcccagtatttt
ggtgatgagaatgcgccgcagcgttgcgggcattgttcggtgtgccacggtcatgtcgcg
catttgccggcgccgtcgagcctgccgccgcttgtggataaaaacttcatgggactgtgc
ggtgattttatccacaggcatcatgagcacaccggtcacttgccaggtgcggagcggctg
acgcgcttcctgggcggtatcagcgtgccgttgttcaccaagttgaaggcacggggcatt
ccggggtttgcagcgctggaagactacccctacgccgaagtgcgcgaatgggcagcagcc
catttgaatgacctgtaa
DBGET
integrated database retrieval system
