Pseudomonas gorinensis: U771_04290
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Entry
U771_04290 CDS
T02969
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
psk
Pseudomonas gorinensis
Brite
KEGG Orthology (KO) [BR:
psk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psk03400
]
U771_04290
Enzymes [BR:
psk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
U771_04290
DNA repair and recombination proteins [BR:
psk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
U771_04290
Prokaryotic type
U771_04290
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
CAP59_mtransfer
Motif
Other DBs
NCBI-ProteinID:
AHC33410
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All DBs
Position
complement(957488..958933)
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AA seq
481 aa
AA seq
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MHLTWLRTDLRLHDNTALAAASQRGPVAAVYLITPQQWLAHDDAPCKVDFWLRNLQHLSQ
ALGALNIPLLIRHAETWDQAPAVLSQLCRELSVTSVHVNEEYGIHESRRDAAVAQALDAD
GVAFHSYLDQLLFQPGSVLTKTGTYFQVFSQFRKVCYSRLHTALPRLVATPKAQAALKLK
SDPVPHQVEGFEPPSETLRALWPAGEDEARRRLDAFADQQISDYKDERDFPAKPGTSQLS
AYLAAGVVSPRQCLHAALQTNQGEFESGDIGAITWINELLWREFYKHILVGYPRVSRHRA
FRPETEALAWRDAPQDLAAWQQARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFSPLSQSEKFDSEGVFIK
HWLPQLAALNKKEVHNPAAVGGLFGVADYPRAIVDLKQSRERALAAFRSLPSRQAVGAEH
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgacctggctgcgcaccgacttgcgcctgcacgacaacaccgccctggccgcc
gcgagccagcggggcccggtggccgccgtgtacctgatcaccccgcagcaatggctggcc
cacgatgacgcgccctgcaaagtcgacttctggctgcgcaacctgcagcacttgagccag
gcgctgggtgcgctgaacattccgttgctgatccgccacgccgagacctgggaccaggcg
cctgccgtgctgagccaactgtgccgggaattgtcggtgacgtcggtgcacgtcaacgag
gaatacggcatccatgaaagccgtcgcgacgcggccgtcgcccaggccctggacgccgat
ggcgtggccttccacagctacctggaccaactgcttttccaaccgggcagcgtactgacc
aagactggcacctacttccaggtgttcagccagttccgcaaggtgtgctacagccgcctg
cacactgctttaccccggttagtggcgacgcccaaggcccaagccgcactcaagctcaag
agcgacccggtccctcaccaggtcgaagggttcgaaccaccgagcgagacactgcgcgcg
ctatggcccgccggcgaagacgaggcccgccgccgcctcgacgccttcgccgaccagcag
atcagcgactacaaggatgagcgtgacttcccggccaaacccggcaccagccagctctcc
gcgtacctcgcggccggcgtggtgtcgccgcgccaatgcctgcacgccgcgctgcaaacc
aaccagggcgaattcgaaagcggcgacatcggcgcgatcacgtggatcaatgaattgctc
tggcgggagttctacaaacacattctggtgggctacccccgggtgtcgcgccaccgcgct
ttccgccccgaaaccgaagcgctggcctggcgcgatgcgccccaggatctcgccgcctgg
cagcaagcgcgtaccggcctgccgatcatcgatgccgccatgcgccaactgctggagacc
ggctggatgcataaccgcctgcgcatggtggtggcgatgttcttgaccaagaacctgctg
atcgactggcgcgaaggtgagcgcttcttcatgcgtcacctgatcgacggcgacctggcg
gccaacaacggcggctggcagtggagttcgtccaccggtaccgattcggcaccctacttc
cggattttcagcccgctgagccagtcggaaaaattcgacagcgaaggcgtctttatcaag
cactggctaccgcagctggcggcgctgaataaaaaggaagtgcacaaccccgcagccgtc
ggcggcttgttcggcgtggccgattacccccgcgccatcgtcgacctcaagcaatcgcgc
gaacgcgccttggcggctttccgcagcctgccatcgcgccaggcagtcggagccgagcat
gagtga
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