KEGG   Pseudomonas gorinensis: U771_06405
Entry
U771_06405        CDS       T02969                                 
Name
(GenBank) transcriptional regulator
  KO
K03530  DNA-binding protein HU-beta
Organism
psk  Pseudomonas gorinensis
Brite
KEGG Orthology (KO) [BR:psk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psk03032]
    U771_06405
   03036 Chromosome and associated proteins [BR:psk03036]
    U771_06405
   03400 DNA repair and recombination proteins [BR:psk03400]
    U771_06405
DNA replication proteins [BR:psk03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    U771_06405
Chromosome and associated proteins [BR:psk03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    U771_06405
DNA repair and recombination proteins [BR:psk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      U771_06405
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 SSPI
Other DBs
NCBI-ProteinID: AHC33828
LinkDB
Position
1399093..1399374
AA seq 93 aa
MALTKDQLIADIAEAIDAPKTTARAALDQLGQIVADQLENGGEITLPGIGKLKVTERPAR
TGRNPSTGAAIEIAAKKVIKLVVAKSLTDAVNK
NT seq 282 nt   +upstreamnt  +downstreamnt
atggctttgactaaagaccaactgatcgctgatatcgctgaagctatcgacgcgccaaaa
accaccgcgcgcgcagctctggaccaactgggccagatcgttgctgatcagctggaaaac
ggcggcgaaatcactctgccaggtatcggcaagctgaaagtgaccgagcgtcctgcccgt
actggccgtaacccttcgactggcgctgccatcgaaatcgctgccaagaaagttatcaag
ctggttgtggccaaaagcctgaccgacgctgttaacaagtaa

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