Pseudomonas gorinensis: U771_07190
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Entry
U771_07190 CDS
T02969
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
psk
Pseudomonas gorinensis
Brite
KEGG Orthology (KO) [BR:
psk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psk03009
]
U771_07190 (rimO)
Enzymes [BR:
psk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
U771_07190 (rimO)
Ribosome biogenesis [BR:
psk03009
]
Prokaryotic type
ribosomal protein modification factors
U771_07190 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
AHC33985
LinkDB
All DBs
Position
complement(1570368..1571708)
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AA seq
446 aa
AA seq
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MSTTIAKANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRNVHPSVLAVTGPQQYEQVVNAVHDVVP
PRQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSSLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKNWREICPD
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANLLDLAVVPDDVK
QDRWERFMAHQQAISSARLQLRIGKEIEVLIDEVDEQGAVGRCFFDAPEIDGNVFIDDAT
GLKPGDKVWCTVTDADEYDLWAEKRD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaccatcgcaaaggccaaccccaaggttggctttgtttccctgggttgcccg
aaggccctggttgactccgaacgcatcctgacccaactgcgcatggaaggttatgacgtg
gtgtccacttaccaggacgcggacgtggtggtggtcaatacctgcggcttcatcgactcg
gccaaggcagagtcgctggaagtgatcggcgaagccatcaaggaaaacggcaaggtcatc
gtgaccggctgcatgggtgtggaagaaggcaatatccgcaatgtgcacccgagcgtgttg
gcggtgaccggcccgcagcagtacgaacaggtggtcaacgccgtgcacgacgtcgtgcca
ccgcgccaggaccacaacccgctgatcgacctggtgccgccgcaaggcatcaagctgacc
ccgcgtcactacgcgtacctgaagatttccgaaggctgcaaccacagctgcagcttctgc
atcatcccgtcgatgcgcggcaagctggtcagccgccccgtgggtgatgtattggacgaa
gcccagcgcctggtcaaatccggcgtaaaagagctgctggtgatctcccaggacaccagc
gcctatggcgtcgacgtgaagtaccgcaccggcttctggaacggcgcgccggtgaaaacc
cgcatgaccgaactgtgcgaagccttgagcagcctgggtgtgtgggtgcgcctgcactac
gtttacccgtacccgcacgtggacgagttgatcccgctgatggccgccggcaagatcctg
ccgtacctggacatcccgttccagcacgccagcccgaaagtgctcaaggccatgaaacgc
ccggccttcgaggacaagaccctggcgcgcatcaagaactggcgcgaaatctgcccggac
ctgatcatccgttcgacctttatcgtgggcttccccggcgaaaccgaagaagacttccaa
tacctgctcgactggctgaccgaagcccagctggaccgcgtcggctgcttccagtactcg
ccggtggaaggtgccccggccaacctgctggacctggccgtggtgccggatgacgtcaag
caggaccgttgggagcgcttcatggcgcatcagcaagcgatcagctcggcgcgcctgcaa
ctgcgcatcggcaaggaaatcgaagtgctgatcgacgaagtcgatgaacaaggcgcggtt
ggccgttgcttcttcgatgcgccggaaatcgacggcaacgtgtttatcgacgatgccacg
ggcttgaagccaggtgacaaggtctggtgcaccgtgaccgacgccgacgaatacgacctg
tgggctgaaaaacgcgactga
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