Pseudomonas gorinensis: U771_07580
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Entry
U771_07580 CDS
T02969
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psk
Pseudomonas gorinensis
Pathway
psk03030
DNA replication
psk03430
Mismatch repair
psk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U771_07580 (dnaE)
03430 Mismatch repair
U771_07580 (dnaE)
03440 Homologous recombination
U771_07580 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psk03032
]
U771_07580 (dnaE)
03400 DNA repair and recombination proteins [BR:
psk03400
]
U771_07580 (dnaE)
Enzymes [BR:
psk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
U771_07580 (dnaE)
DNA replication proteins [BR:
psk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
U771_07580 (dnaE)
DNA repair and recombination proteins [BR:
psk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
U771_07580 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AHC34061
UniProt:
A0ACA7P2E3
LinkDB
All DBs
Position
1654820..1658341
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLVKTLVGMNMPAVAVTDQNNMCSLVKFYKNAMGAG
IKPICGADLWLSNKDPDNPLSRISLLAMNGVGYRNLTELISRGFIDGQRNGSIIIEREWV
AEASEGLIMLSAAKEGEIGIALLGGNPQEAEVLAREWMAVFPDRFYLEVQRTNRPNDEEH
LHAAVALADKLGAPLVATNDVRFIKKEDFEAHETRVCIGEGRALDDPRRSKNYSEEQYLK
SAEEMAELFSDLPEALENSVEIAKRCNIEVKLGKHFLPNFPIPDGMTIDEYFRKVSFDGL
EERLSVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYV
AEKYGRNAVSQIITFGSMAAKAVIRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFIKVDEEAAEIWEMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEEGGGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVGEEPLDIAFIPLDDKPTYS
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCATNNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNASEFKFTVNDEGRIIYGLGAI
KGVGEGPVEAITEARQDGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFHDEP
KAYQANIDRNRAVLLTAMEEAIKAAEQTARTHDSGHADLFGGLFVEDDADVYANHRKAKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFADAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
IKRVMSMEDARTNLAESLRLKVKTEALKGDQLRWLGDLLKRHRGACPVTMEYTGNDAKAM
LQFGETWRIDPADGLIQALRDQFGRDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcacctgcgcctgcacactgaatactccctggtcgacggcctg
gtacggatcaaacccctggtcaaaaccctggtgggcatgaatatgcccgcggtggcggtt
accgatcagaacaacatgtgctccctggtcaagttctacaagaacgccatgggcgctggt
atcaagccgatctgcggcgccgacctgtggctgtccaacaaagacccggataaccccctg
agccgcatcagcctgttggcgatgaatggcgtgggttatcgcaacctcaccgaattgatc
tcccgcggctttatcgacggtcagcgcaacggctcgatcatcatcgagcgtgagtgggta
gccgaagccagcgagggcttgatcatgctctcggctgccaaagagggcgaaatcggtatc
gcgctgcttggcggcaacccgcaggaagctgaagtgctggcccgcgagtggatggctgtc
ttccccgaccgtttctacctggaagtccagcgtaccaaccgtcccaacgatgaagagcat
ctgcacgccgccgtggcgctggccgacaagctgggtgcaccgttggtggcgaccaacgat
gtgcgctttatcaagaaggaagatttcgaagcccacgaaacccgtgtgtgcatcggtgaa
ggccgggccctggatgacccgcgtcgctcgaagaactacagcgaagagcagtacctcaag
agcgccgaggaaatggccgagctgttcagcgacctgcccgaggccctggaaaactccgtc
gagattgccaagcgctgcaatatcgaggtgaagctgggcaagcacttcctgcccaacttc
ccgattcccgatggcatgaccatcgacgaatacttccgcaaagtctcgttcgatgggctt
gaggagcggctctcggtcctgttgcccaaggacaccaccgaagattacgaagccaagcgc
caggtctacgtcgaccgcctgaatttcgagctggatatcatcatccagatggggttcccc
ggttacttcctgatcgtgatggactttatccagtgggccaagaacaacggcgtgccggta
ggtccgggccgggggtcaggtgccggctcgctggtggcctatgtgcagaagatcaccgac
ctcgatccgttggagtatgacctgctgttcgagcggttcctcaacccggaacgggtctcc
atgcccgacttcgacgtcgacttctgcatggacggtcgcgaccgtgtgatcgagtacgtg
gccgaaaaatacggccgcaacgcggtcagccagatcatcaccttcggttcgatggccgcc
aaggcggtaatccgcgacgttgcgcgggtacaaggcaagtcctacggcctggcggatcgc
ctgtccaagatgatcccgttcgaagtcggcatgaccctggaaaaagcctacgaacaggaa
gaaatcctgcgcgacttcatcaaggtcgatgaagaggctgccgaaatctgggaaatggcg
cgcaagctcgaaggcgtcgtccgtaacgtcggtaagcacgccggtggtgtggtgatcgca
ccgaccaagctgaccgacttttcgccgatctattgcgatgaagaaggcggcggcctggtc
acccagttcgacaaggacgacgtcgaggctgccggcctggtgaagttcgacttcctcggc
ctgcgaaccctgacgatcatcgactgggcgctcaagaccatcaaccgtgaccgtgccaag
gtcggtgaagaaccgctggatatcgcgtttatcccgctggacgacaaaccgacctattca
ctgctgcaaaaagccgaaaccacggcggtattccagctggaatcccgtggcatgaaggag
ctgatcaaaaagctcaagcccgactgcctggaagacttgatcgcactggtcgccctgttc
cgtccgggcccgctgcaatcgggcatggtggatgacttcatcaaccgtaagcacggtcgc
gccgaactggcctacccgcactccgactaccagtacgaaggcctcaagccggtattggcg
ccgacgtacggcatcatcctgtatcaggaacaggtgatgcagatcgcccaggtgatggcc
ggctacaccctgggtggtgcggacatgctgcgtcgcgccatgggtaagaaaaaacccgag
gaaatggccaagcagcgcggtggtttcattgaaggttgcgccaccaacaatatcgacgcg
gacctggccggtaacattttcgacctggtggaaaaattcgccggttacggttttaacaaa
tcccactccgccgcctacggcctggtctcataccagaccgcctggctgaaagcccactac
ccggcgcccttcatggcggcggtactctcggcggatatgcacaacaccgacaaggtcgtg
accttgatcgaggaagtgcgcacgatgaagctgcgtctcgacgcgccggacgtgaacgcc
tcggagttcaagttcacggtcaacgacgagggccgtatcatctatggcctaggcgcgatc
aagggcgtcggcgaaggcccggtggaagccattaccgaagcgcgccaagacggcccgttc
aaggacctgttcgacttctgtgcccgggtcgacctcaagcgcatcaataaacgtaccctt
gatggcttgatccgcagcggcgcactcgaccgtcttggcccgtacttccatgatgagccg
aaggcctaccaggccaatatcgaccgtaaccgcgcggtgctgttgaccgccatggaagaa
gcgatcaaggccgccgagcagaccgcccgtacccacgacagcggccacgccgacctgttt
ggcgggctgttcgtcgaagacgacgcggatgtctatgccaaccatcgcaaggccaaggag
ctgaccctcaaggagcgcctcaagggtgaaaaagacaccctgggcctgtacttgaccggt
cacccgattgacgaatacgaaggtgaaatccgtcgtttcgcccgtcagcgcatcatcgac
ctgaaaccggcgcgcgacacccagaccgtcgccggcatgatcatcgcgctgcgcgtgatg
aaaaataaaaagggcgacaagatgggctttatcaccctcgacgaccgctcgggccggatc
gaagcatcgctgtttgccgatgccttccactccgcccagtcgctgttgcagaccgacgcc
atggtggtggtggaaggggaggtcagcaacgatgacttctccggtggcctgcgcctgcgg
atcaagcgggtgatgagcatggaggatgcgcgcaccaacctggccgaaagcctgcgcctg
aaggtgaaaaccgaagcgctcaagggcgatcagctacgctggttgggtgacctgctaaaa
cgtcaccgtggcgcgtgcccggtgaccatggagtacaccggtaacgacgcgaaggcgatg
ttgcagttcggcgagacctggcgaattgatcccgctgatggcttgattcaagctttgcgt
gaccagtttgggcgagacaacgtcttcctccaataccgttga
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integrated database retrieval system
