Pseudomonas sp. TKP: U771_07790
Help
Entry
U771_07790 CDS
T02969
Name
(GenBank) beta-agarase
Organism
psk
Pseudomonas sp. TKP
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Agarase_CBM
Glyco_hydro_42
Motif
Other DBs
NCBI-ProteinID:
AHC34102
LinkDB
All DBs
Position
1698599..1700893
Genome browser
AA seq
764 aa
AA seq
DB search
MIRTLPALFALLFAAPLMAAPSGQQTLFNFVRPADVVKVATQDASLPQYNAEQTPEGEVL
RRITFNPAAEPSLVLSPQSGVWDWSQSGAMSLRIQSAMDWALTLYVKVQSNDGKTLVSRI
DLPAGPAQTLLVPLQANSPLSQGMKAGPPMPITVDGQRVLLASSAGEIDRSQVVSVTLSM
IKPNVAQSILLERFGVQDSEPAFKAAYSNLVDAYGQSTRARWPEKVSSDEQLKAAAAKEQ
QQLKTWLAERDKSALDQYGGWNKGPAFDASGFFRTEKRDGRWYLVTPEGHPFYSLGVNTV
ASDNNQTYVAGREWMFGALPQAGEPFDKYYGSSDHRTGNGAGEGRSFAAGRWYDFYRANL
QRTYDTDGYDQKRWISHTLDRLQAWGFNTIGNWSAADLATADRVPYTLPLSIVGDYASIS
TGTDWWGGMPDPFDPRFAMATERAVAIAARDHRDDPWLIGFFADNELAWAGPGDDPKSRY
ALAYGTLRMTTDVPAKRAFLKQLRDKYRNEEGLSRAWGIHLAGWELMEDPGFEPPMPSPE
HPEIEADFKYFQKTFADTYFKTISDSLKWHAPNQLLLGGRYAVSTPEAVASCAQYCDVLS
FNMYTLKPQDGYDFAALRALDKPVLITEFNFGSADRGPFWGGVTQLAREEDRGAAYATFL
KQAMAEPSIVGVHWFQYLDQPVTGRLLDGENGHFGLVGITDIPFQGFVDSVRKSNLAAVD
QLGKEAEKAKAASAVHEHEGGNAHDGKGAGQGAGHAGGHSGNGH
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcacgctgcccgccctttttgccctgctgttcgccgcgcccttgatggccgcg
cccagcgggcaacaaacattgttcaacttcgtccggcctgccgatgtggtcaaggtggcg
acccaggacgccagcctgccgcaatacaacgccgaacaaaccccggaaggcgaggtgctg
cgccgcatcacgttcaacccggccgccgaaccgagcctggtgctgagcccgcaaagcggc
gtgtgggactggtcgcagtccggcgccatgagcctgcgtatccagagtgccatggactgg
gcgttgaccctgtacgtcaaggtgcagagcaacgacggcaagaccctggtcagtcgcatc
gacctgcctgcgggcccggcccagaccctgctggttccgttgcaagccaactcgccgctg
agccagggcatgaaggcgggcccgccgatgccgatcaccgtcgacggccagcgcgtgttg
ctggccagcagcgccggggagatcgaccgcagccaggtggtctcggtgaccctgtcgatg
atcaagcccaatgttgcgcaaagcatcctgctggagcgcttcggcgtgcaggacagcgag
ccagcgttcaaggctgcctacagcaacctggtggacgcctatggtcaatccacgcgtgcg
cgctggccggaaaaggtcagcagcgacgaacaactcaaggccgccgctgccaaggagcag
caacagctcaagacgtggctggccgagcgggataagtccgcactggatcaatacggcggt
tggaacaaagggccggcgttcgatgccagcggctttttccgcaccgagaaacgtgacggt
cgctggtacctggtgacgccggaaggccacccgttctactccctgggcgtgaacaccgtg
gcgtcggataacaaccagacctacgtggcgggtcgtgaatggatgttcggggcgttgccc
caggctggtgaacccttcgacaagtactatggcagcagcgatcatcgcaccggcaatggc
gcaggcgaaggccgcagctttgcggcggggcgctggtacgatttctaccgcgccaacctg
cagcgtacctacgacactgatggttacgaccagaagcgctggatcagccacaccctcgac
cgcctgcaggcctggggcttcaacaccatcggcaactggagcgccgcggacctggccacc
gccgaccgcgtaccgtacaccttgccgctatcgatcgtcggcgattacgccagcatcagc
accggtaccgattggtggggcggcatgcccgacccgttcgaccctcgcttcgccatggcc
actgagcgcgccgtagccatcgctgcccgcgatcaccgcgatgacccgtggctgattggc
ttctttgccgacaacgaattggcctgggccggccccggtgatgatcccaagtcacgctat
gccctggcctacggcacgttgcgcatgaccaccgacgtcccggccaaacgtgcgttcctc
aagcaattgcgcgacaagtaccgcaatgaagaaggcctctccagggcctggggtatccac
ctggcgggctgggagttgatggaagacccaggcttcgaaccgccgatgccgagtcctgag
cacccggaaatcgaagccgacttcaaatatttccagaaaaccttcgccgacacctatttc
aagaccatttccgattcgttgaagtggcatgcccccaaccagttgctgctgggtggccgt
tacgccgtgagtacgccggaagccgtggcctcctgtgcgcagtattgcgacgtgttgagc
ttcaacatgtacacgctcaagcctcaggacggttatgacttcgctgcgttgcgcgcattg
gacaagcccgtattgatcaccgaattcaacttcggctctgcagaccgtggcccgttctgg
ggcggtgtgacgcagttggccagggaagaagaccggggggcggcgtatgcgaccttcctc
aagcaggccatggccgagccgtcgatcgtcggcgtgcattggttccagtacctggaccaa
ccggttaccggtcgcctgctggacggtgaaaacggccacttcggcttggttggcattacc
gatatcccattccaggggtttgtcgacagcgtgcgcaagagcaacctggcggcggtcgac
caactgggcaaggaagccgaaaaggccaaggcggccagtgcggtgcatgagcacgaaggc
ggcaacgcgcatgatggcaaaggtgcggggcagggcgctgggcacgccggcgggcactct
ggaaatggtcattga
DBGET
integrated database retrieval system
