Pseudomonas gorinensis: U771_08705
Help
Entry
U771_08705 CDS
T02969
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
psk
Pseudomonas gorinensis
Brite
KEGG Orthology (KO) [BR:
psk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psk03016
]
U771_08705
Enzymes [BR:
psk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
U771_08705
Transfer RNA biogenesis [BR:
psk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
U771_08705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AHC34283
LinkDB
All DBs
Position
1879974..1881107
Genome browser
AA seq
377 aa
AA seq
DB search
MAIDIHWICDNDSLGQHCAEWQQLPFVALDTEFMRVDTFYPIAGLIQIGDGQRAYLIDPL
TIDNWQPLAALLENPAVIKVVHACSEDLEVLLRLTGSLPVPLFDTQLAAAYLNLGFSMGY
SRLVQAVLDIDLPKGETRSDWLQRPLSETQVSYAAEDAVHLAEVYIRLRPQLSDDKYAWV
LEDGAELVANLRREVDPYEVYREAKLAWKLSRAQLAVLRELCAWREQQARARDLPRNRII
REHSLWPLAKSQPDNLAALGKIEDMHPRTVRQDGQFLLDLIKRAGSVPMDQWPPAVAEPL
PVDAATLIKQLRALGQAFAERLDMAPELMLRKKTLEALVKSGYPDGPYKLPDSLRGWRRE
LMGQVLLDSLATAGEQP
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtggccatcgatattcactggatctgcgacaacgatagcctcggccagcattgcgccgaa
tggcagcagttgccattcgtcgccctcgacaccgaattcatgcgggtcgataccttttat
cccattgccgggctgatccagattggcgatggccagcgtgcttacctgatcgaccccctg
accatcgacaattggcaacccctggcggccttgctggaaaacccggcggtgatcaaggtg
gtccacgcgtgcagcgaagacctggaagtgttgctgcgcctgaccggcagcctgccggtg
ccgttgttcgacacccaattggccgcggcgtacctgaacctcgggttctccatgggctat
tcgcgcctggtgcaagccgtgctcgacatcgacctgcccaagggcgagacccgctcggac
tggctgcaacgccccttgtccgagacccaggtgagctacgccgccgaagacgcggtgcac
ctggccgaggtctacatccgcctgcgcccgcaactgtcggatgacaaatacgcctgggtc
ctggaagacggcgccgagctggtggccaacctgcgccgcgaagtcgacccgtacgaggtg
taccgcgaggccaagctggcgtggaaattgtcccgtgcccaactcgccgtattgcgcgag
ctgtgtgcctggcgcgagcagcaagcgcgtgcccgcgacctgccacgcaaccgcatcatc
cgcgaacactcgttgtggcccctggccaaatcccagccggataacctcgccgcgctgggc
aaaatcgaagacatgcacccgcgcaccgtgcgtcaggacggccagttcctgctggacctg
atcaagcgtgccggcagcgtgcccatggaccaatggccgcccgccgtggctgaaccgctg
ccggtggacgccgccacgctgatcaagcaactgcgcgccctcggccaggcgttcgccgag
cgcctggacatggcgccggaactgatgctgcgcaagaaaaccctcgaagccctggtcaaa
agtggctaccccgatgggccttataaactgccagactcgctgcgtggctggcgccgcgag
ttgatgggccaggtgctgctcgacagcctggccactgccggagaacagccttga
DBGET
integrated database retrieval system
