Pseudomonas gorinensis: U771_08895
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Entry
U771_08895 CDS
T02969
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
psk
Pseudomonas gorinensis
Pathway
psk00071
Fatty acid degradation
psk00280
Valine, leucine and isoleucine degradation
psk00310
Lysine degradation
psk00362
Benzoate degradation
psk00380
Tryptophan metabolism
psk00410
beta-Alanine metabolism
psk00640
Propanoate metabolism
psk00650
Butanoate metabolism
psk00907
Pinene, camphor and geraniol degradation
psk00930
Caprolactam degradation
psk01100
Metabolic pathways
psk01110
Biosynthesis of secondary metabolites
psk01120
Microbial metabolism in diverse environments
psk01200
Carbon metabolism
psk01212
Fatty acid metabolism
Module
psk_M00087
beta-Oxidation
psk_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
U771_08895 (fadB)
00650 Butanoate metabolism
U771_08895 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
U771_08895 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
U771_08895 (fadB)
00310 Lysine degradation
U771_08895 (fadB)
00380 Tryptophan metabolism
U771_08895 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
U771_08895 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
U771_08895 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
U771_08895 (fadB)
00930 Caprolactam degradation
U771_08895 (fadB)
Enzymes [BR:
psk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
U771_08895 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
U771_08895 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
U771_08895 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
U771_08895 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AHC34321
LinkDB
All DBs
Position
1918899..1921046
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMSATAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENKAEDAL
KVGAVDAVVAPDKLAEAALNLIKGAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVK
DDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAIATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYETDKKGKQ
KKVADPSVHEVLAPVIYEQREVSDEDIVNWMMIALCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMARNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaactg
cgtcaggccgtagacaccatcaaagcagatgcttcggtcaagggcgtgatcgtctccagc
ggcaaggacgtgtttatcgtcggcgctgacatcaccgaattcgtcgacaacttcaagctg
cccgatgccgagctggtggctggcaacctcgaagccaacaagattttcagcgatttcgaa
gacctcaacgtgccgaccgttgccgccatcaatggcatcgccttgggcggcggcttggaa
atgtgcctggccgcagacttccgcgtcatgtcggccactgccaagatcggcctgcctgaa
gtcaagctgggcatctacccaggcttcggcggtaccgtgcgtctgccgcgcctgatcggt
gccgacaacgccatcgagtggatcgccgccggtaaggaaaataaagctgaagacgcgctg
aaagtcggtgccgtcgacgctgtggttgccccggacaaactggccgaagctgcactgaac
ctgatcaaaggcgccatcagcggcgaatttgactacaaggccaagcgtcagccgaagctg
gaaaaactcaaactcaacgccatcgaacaaatgatgtcgttcgaaaccgccaagggtttc
gtggccggccaggccggtccgaactacccggcgccggttgaagcgatcaagaccatccag
aaggccgcgaacttcggtcgcgacaaagccctggaagtggaagcggcgggtttcgtcaaa
ctggccaagacctctgctgcccagagcctgatcggcctgttcctgaacgatcaggaactg
aagaaaaaggccaaggcctacgacgaaatcgccaaggacgtgaaacaggcagccgtactc
ggtgccggcatcatgggtggcggtatcgcctatcagtcggcgtccaaaggcacgccgatc
ctgatgaaagacatcaacgaacacggtatcgagcagggcctggcggaagccgccaagctg
ctggtgggccgcgttgataaaggtcgcatgaccgctgcgaaaatggctgaagtgcttaac
ggcattcgtcctacgctgtcctacggcgatttcggccatgtcgacctggtggtcgaagcg
gttgtcgagaacccgaaggtcaagcaagccgtactggctgaagtggaagcgcaggtcaaa
gacgacaccatcctggcgtccaacacctcgacgatctccatctcgctgctggccaaggcg
ctcaagcgtccggaaaacttcgtcggcatgcacttctttaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgagttggccatcgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaatgattgcccgggcttcctggtc
aaccgcgtgttgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtggac
ttcgtgcgcatcgacaaggtcatggaaaaattcggctggcccatgggcccggcgtacctg
atggacgtcgtcggcatcgacaccggccaccacggccgcgacgtgatggctgaaggcttc
ccggaccgtatgaaagacgaccggcgctcggcgatcgacgcgctctacgaggccaagcgc
ctgggtcagaaaaacggcaagggcttctacgcctacgagaccgacaagaagggcaagcag
aagaaggtcgctgacccgtcggtccacgaggtgcttgcgccggtcatctatgaacagcgt
gaggtgtccgacgaggacatcgtcaactggatgatgatcgccctgtgcctggagaccgtg
cgttgcctggaagacggcatcgtcgagaccgctgccgaagccgatatgggcctggtatac
ggtattggtttccctccattccgtggtggtgcgctgcgttacatcgactcgatcggtgta
gccgaattcgttgccctggctgatcaatacgctgatttgggcccgctgtaccacccgacc
gcgaagctgcgtgagatggccaggaatggccagagcttcttcggttaa
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