KEGG   Pseudomonas gorinensis: U771_14795
Entry
U771_14795        CDS       T02969                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psk  Pseudomonas gorinensis
Pathway
psk02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psk00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    U771_14795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psk03021]
    U771_14795
Transcription machinery [BR:psk03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     U771_14795
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF Sigma70_r4 GerE HTH_23 HTH_11 PhyR_sigma-like DUF6362 HTH_28 RovC_DNA-bd HTH_29 HTH_38 HTH_7 HTH_24 TnsD HTH_31 HTH_40 HTH_36 HTH_Tnp_ISL3 HVO_A0261_N Xre-like-HTH HTH_AsnC-type DUF8073_M HTH_Mga
Other DBs
NCBI-ProteinID: AHC35483
UniProt: A0ACA7P6B1
LinkDB
Position
3226533..3227051
AA seq 172 aa
MNDAVVPTHAPELTLSSLYREHRGWLESWLRRRLGNAWDAADLSQDTFLRVLASAQPIAQ
MQEPRAYLVTVGKRLLVNFHQRRSLEQAYLNALANLPEACVPSPEQRWLVLETLQALDEL
LDGLPVLVRRAFLWSQLEGLGYREIAERLEVSERTVKRYMAQAYEHCLLVDL
NT seq 519 nt   +upstreamnt  +downstreamnt
atgaatgatgctgttgtcccgacgcacgcccccgaactgaccctgtcgagcctgtaccgt
gagcatcgcggctggctggaaagctggctgcggcggcgcctgggcaatgcctgggatgca
gcggacctgagtcaggacacctttttgcgggtgctcgccagtgcccagccgattgcgcag
atgcaggagccacgggcttatctggtgacggtgggcaagcgcctactggtcaattttcat
cagcggcgcagcctggaacaggcttacctgaacgccctggcgaacctgcccgaagcctgt
gtgccgtcgcccgagcagcgctggctggtgctggaaaccttgcaagccctggatgaactg
ctcgacggcttgccggtgctggtgcgccgcgcgtttctctggagtcagctcgaaggcttg
ggttatcgcgagatcgccgagcggctggaggtgtcggagcgcacggtgaaacgctacatg
gcgcaggcgtatgagcattgcctgttggtggacctgtga

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