Pseudomonas gorinensis: U771_14795
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Entry
U771_14795 CDS
T02969
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psk
Pseudomonas gorinensis
Pathway
psk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
U771_14795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psk03021
]
U771_14795
Transcription machinery [BR:
psk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
U771_14795
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
GerE
HTH_23
HTH_11
PhyR_sigma-like
DUF6362
HTH_28
RovC_DNA-bd
HTH_29
HTH_38
HTH_7
HTH_24
TnsD
HTH_31
HTH_40
HTH_36
HTH_Tnp_ISL3
HVO_A0261_N
Xre-like-HTH
HTH_AsnC-type
DUF8073_M
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
AHC35483
UniProt:
A0ACA7P6B1
LinkDB
All DBs
Position
3226533..3227051
Genome browser
AA seq
172 aa
AA seq
DB search
MNDAVVPTHAPELTLSSLYREHRGWLESWLRRRLGNAWDAADLSQDTFLRVLASAQPIAQ
MQEPRAYLVTVGKRLLVNFHQRRSLEQAYLNALANLPEACVPSPEQRWLVLETLQALDEL
LDGLPVLVRRAFLWSQLEGLGYREIAERLEVSERTVKRYMAQAYEHCLLVDL
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgctgttgtcccgacgcacgcccccgaactgaccctgtcgagcctgtaccgt
gagcatcgcggctggctggaaagctggctgcggcggcgcctgggcaatgcctgggatgca
gcggacctgagtcaggacacctttttgcgggtgctcgccagtgcccagccgattgcgcag
atgcaggagccacgggcttatctggtgacggtgggcaagcgcctactggtcaattttcat
cagcggcgcagcctggaacaggcttacctgaacgccctggcgaacctgcccgaagcctgt
gtgccgtcgcccgagcagcgctggctggtgctggaaaccttgcaagccctggatgaactg
ctcgacggcttgccggtgctggtgcgccgcgcgtttctctggagtcagctcgaaggcttg
ggttatcgcgagatcgccgagcggctggaggtgtcggagcgcacggtgaaacgctacatg
gcgcaggcgtatgagcattgcctgttggtggacctgtga
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