Pseudomonas gorinensis: U771_17865
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Entry
U771_17865 CDS
T02969
Name
(GenBank) glycogen debranching protein
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
psk
Pseudomonas gorinensis
Pathway
psk00500
Starch and sucrose metabolism
psk01100
Metabolic pathways
psk01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
psk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
U771_17865
Enzymes [BR:
psk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
U771_17865
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Glyco_hydro_31_2nd
GHL5
Motif
Other DBs
NCBI-ProteinID:
AHC36092
LinkDB
All DBs
Position
3904288..3906447
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AA seq
719 aa
AA seq
DB search
MSKADNHQAAPAHEPSRIREGLPFPLGATWDGLGVNFALFSANATKVELCLFDDTGEVEI
ERIELPEYTDEIFHGYLPDAHPGLIYGYRVYGAYDPANGHRFNHHKLLIDPYAKQLVGEL
KWSEALFGYTIGHPDDDLSFDERDSAPFVPKCKVIDPAHTWGNDQPVRVPWDRTIIYETH
LRGISMRHPSVGESVRGTCAGLMEDDVLKHIRQLGISSVELLPVHAFVNDQHLLEKGMTN
YWGYNSIAFFAPDPRYLASGKIAEFKEMVAHLHEAKLEVILDVVYNHTAEGNERGPTLSM
RGIDNASYYRLMPDDKRFYINDSGTGNTLDLSHPCVLQMVTDSLRYWANEMHVDGFRFDL
ATILGRYRDGFDERHSFLVACRQDPVLRQLKLIAEPWDCGPGGYQVGNFPPGWVEWNDRF
RDTVRAFWKGDDGQLADFAGRMTASGEMFNHRGRRPYSSVNFITAHDGFTLHDLVSYNDK
HNEDNDENNQDGTSNNLSWNHGVEGPTDDPEINALRLRQMRNFFATLLLAQGTPMLVAGD
EFARTQHGNNNAYCQDSEIGWVNWDLDDDGKALLKFVKRLIKLRMAYPILRRGRFLVGDY
NEDIGVKDVTWLSPDGNEMTTEQWEDSHGRCLGMLMDGRAQETGIRRAGADATLLLVVNA
HHDMVNFRLPPVPQGEFWTCMLDTNQPAVRGQERFEFEHEYAVTGRSLLLFELQRDDEV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagccgataaccaccaagcggccccggcccacgagccatcgcggatccgcgaa
ggtttgcccttccccctgggcgcgacctgggacggcctgggtgtcaactttgccctgttc
tcggccaacgccaccaaagtcgagctgtgcctgttcgacgataccggcgaagtcgaaatc
gaacgcatcgaactgcctgaatacaccgacgaaatcttccacggctatctgcccgacgcc
caccccgggctgatttacggctaccgcgtgtacggtgcgtatgacccggccaacggccat
cgtttcaaccaccacaaattgctgatcgacccctatgccaaacagctggtgggcgaactc
aaatggtccgaggcgctgttcggctataccatcggccacccggacgacgacctcagtttc
gacgaacgcgacagcgcccccttcgtgcccaaatgcaaagtcatcgacccggcgcacacc
tggggcaacgaccagcctgtgcgtgtgccctgggaccgtacgatcatttatgaaacccac
ctgcgtggcatcagcatgcgccacccatcggtgggcgagtcggtgcgaggtacctgcgcc
ggcctgatggaagatgacgtgctcaagcatatccgtcagttgggcatttcctcggtcgag
ctgctgcccgtgcacgcctttgtcaacgaccagcacttgctggaaaaaggcatgaccaac
tactggggctacaacagcatcgcgttcttcgcccccgacccacgctacttggccagcggc
aagatcgccgagttcaaggagatggtcgcgcacctgcacgaagccaagctggaagtgatc
ctcgacgtggtctacaaccacaccgccgaaggcaatgagcgcggcccgaccctgtccatg
cgcggcatcgacaacgcctcttactatcgcctgatgcccgacgacaagcgcttctatatc
aacgactccggcacgggcaacaccctcgacctgagccacccgtgcgtcctgcagatggtg
accgactcgctgcgttattgggccaacgaaatgcacgtcgacggtttccgcttcgacctg
gcgaccatcctcggccgctaccgtgacggcttcgacgagcgccacagtttcctcgtcgcc
tgtcgccaggacccggtcctgcgccagttgaaacttatcgccgaaccctgggactgcggc
cccggcggctaccaggtgggtaacttcccgccaggctgggtggaatggaacgaccgtttc
cgcgacaccgtgcgtgccttctggaaaggtgacgacggccagcttgcagattttgccggg
cgcatgaccgcctccggcgagatgttcaaccatcgcggccgtcgcccgtacagctcggtg
aacttcatcaccgcccatgacggtttcaccttgcacgacctggtctcctacaacgacaag
cacaacgaagacaacgacgaaaacaaccaggacggcaccagcaacaacctgtcctggaac
cacggcgtcgaaggccccaccgacgaccctgaaatcaacgcactgcgcctgcgccagatg
cgcaacttcttcgccacgctgctgctggcccaaggcacgccgatgctggtggccggggac
gagttcgcccgcacccagcacggcaataacaacgcctattgccaggacagcgaaatcggc
tgggtcaactgggacctggacgacgacggcaaggcgctgctcaagttcgtcaaacgcctg
atcaagctgcgaatggcttatccgatcctgcgtcggggtcgcttcctggtgggcgattac
aacgaagatataggcgtgaaggacgtcacctggctgtcaccggatggcaacgagatgacg
accgagcaatgggaagacagccatggtcgctgcctgggcatgttgatggatggtcgcgcc
caggaaaccgggattcgccgcgcgggcgccgatgccaccttgttgctggtggtcaatgcc
catcatgacatggtcaatttccgcctgccgccggtgccgcaaggtgagttctggacctgc
atgctggataccaaccagccagcggtacgcggccaggagcgctttgagttcgaacacgaa
tacgcggtcaccggccgttcgctgttgctgtttgaattgcagcgtgacgacgaggtgtga
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