Pseudomonas gorinensis: U771_18735
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Entry
U771_18735 CDS
T02969
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
psk
Pseudomonas gorinensis
Brite
KEGG Orthology (KO) [BR:
psk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psk03400
]
U771_18735
DNA repair and recombination proteins [BR:
psk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U771_18735
Archaeal homologous recombinant proteins
U771_18735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AHC36264
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Position
4107675..4108916
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AA seq
413 aa
AA seq
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MRLFHTSDWHLGQNLHGQERDFEHACFLEWLLRQLHAHQPDALLIAGDIFDTVNPPLKAQ
ERLYDFIISAHEQNPDLTIVMIAGNHDSGSRIELPAPLMRRLHTHALGRVLWLDDGQLDA
ERLLIPLPNAKGKVAAWCLALPFLRPAEVTGAHLGDDYLHGIGQVHEWLIAAANAKRKKG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPAKLFDKSVGYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIGYKHQILDVTFQGERLVSVEPLLIPRSVNLQRLEAAPLADILKQL
AELPDIDLLAETQRHPWLEVRVRLDEPQPDLRQQIETALQGKAVRLVRIAAEYAGKRGSD
DTDDQHLIELDQLTPQELFSRAWQDSYGSEVDEQTLKDFAVLLQEVQQEGEQP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgttccacacctccgactggcaccttgggcaaaacctgcacggccaggaacgc
gacttcgaacatgcctgtttccttgagtggctgctgcgccagctccatgcccaccaacct
gatgcgctgttgatcgccggcgacatcttcgacacggtcaacccgccgctcaaggcccag
gagcgtctgtacgacttcatcatcagcgcccacgaacaaaaccccgacctcaccatagta
atgatcgccggcaaccacgactccggctcgcggatcgaactgcccgcccctttgatgcgg
cgcttgcacacccatgccctgggccgcgtgctatggctggacgacggccaactggacgcc
gaacgcctgctgattcccctgccgaatgccaagggcaaggttgccgcgtggtgcctggcg
ctgccgttcctgcgcccggcggaagtcaccggggcgcacctgggcgacgactacctgcac
ggcatcggccaggtccatgaatggctgatcgccgccgccaacgccaaacgcaaaaaaggc
caggcgctgattgccatcagccatgcgcacatggccggcggctcggtgtcggaagactcc
gagcgcagcctgatcatcggcaatgccgaggcgctaccggccaaactgttcgataaaagt
gtcggctatgtcgccctcggccatttgcacaagccgcaaaaggtgaatggcgaagagcgc
attcgctacagcggctcgccgattccactgtcgttttccgaaattggctacaagcaccag
attctcgacgtgacgttccagggcgaacgactggtcagcgtcgagccgctcctgatcccg
cgttcggtcaacctgcaacgcctggaagcggcgcccctggccgacatcctcaagcaactg
gccgagctgcccgacatcgacctgttggccgaaacccagcgccatccctggctggaggtg
cgggtacgcctggacgagccgcaacccgacctgcgccagcaaatcgaaaccgccctgcaa
ggcaaggccgtgcgcctggtgcgcatcgctgccgaatacgccggcaaacgcggcagcgac
gacacggacgatcaacacctgatcgaactcgaccagctcactccccaggagctgttcagt
cgcgcctggcaggacagctacggcagtgaagtggatgaacagaccttgaaggatttcgcc
gtgctgctccaggaagtacaacaggagggcgaacagccatga
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