Pseudomonas gorinensis: U771_18740
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Entry
U771_18740 CDS
T02969
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psk
Pseudomonas gorinensis
Brite
KEGG Orthology (KO) [BR:
psk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psk03400
]
U771_18740
DNA repair and recombination proteins [BR:
psk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U771_18740
Archaeal homologous recombinant proteins
U771_18740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
AAA_15
ATS
ABC_tran
nSTAND3
RsgA_GTPase
nSTAND_NTPase5
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHC36265
LinkDB
All DBs
Position
4108913..4112551
Genome browser
AA seq
1212 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LGDTGQAKMPDADTDISIGDPRTLIRRGTGGGYAEVDFVGVNGRRYRARWEANRARDKAS
GKLQNSRQSLIDLDSDQLLASQKTEYKTQLELALGLNFEQFTRAVLLAQSEFSAFLKAND
NERSELLEKLTDTALYTQLGRRAFDKAKDAKDAHKQLQDQATGVVPLAPEARAELDQQLA
DAQQQLKTQQNQLKQLELQHTWLKELREWQERQRSATEQLQRAQAEWDNQATQRQDLSRL
DQLAPQRHQFARRAELLTLLTPLAAQIQAHIEQQAELHTRQAQAQQQQASAQAALAEALK
AQGDAVPLLRQAFEAQSTLAHLTRDLAKRTEDKQQHETACTEGQALLKGLQDKHAHVAER
LQRLAAELERSSALAPLSEAWGAYRDRLQQLMLIGNRLKKGQSELPQLEQRATTAAEKFA
QQRDALDLLYQEAGAEPHAVAEQIQLLASLLQDNRKQQRAFEDLTRLWDSQQQLDQQAAA
LRQKLADAQQQREQLNQTGLQTKAELAVAEQTLTVTKQLLERQRLARSASVEELREQLQD
GQPCPVCGSHEHPYHQPEALLQSLGRHDESEEATAQKAVDTLKEKLTELRGEVGGLIAQQ
KEFLQQQEHLATQQHALQPSLDAHPLAASLFNQDEAKRSHWLAQQLSQLTQSITQDEQRQ
GALLNLQQNAGRLQQQLQAAQDASQQARQLLVDQQRELSNDRERLDEELNAFASLLPADT
LEGLRSDPAATFMQLDQQVSQRLEQLGHQHDELAEQQERQQAIEKEHTHQQHRQQQLDVL
HQQVTELSEQQQAAQATLTALLGEHTSAEHWQQQLEQVVVQSRQSEADANQQLQDIRNQL
IQLAADLKAQQERQQSFEAEQHTLDARTNEWRALHPELDDHGLARLLAFDDKQVSELRQQ
VQHSEKAVEQAKVLLQEREQRLAEHLALHNGNLEAEALDSALAALNQQLAEGEKQCAELR
ARQADDQRRQDANHALAEQIARAYDEWQRWARLNALIGSATGDTFRKIAQAYNLDLLVHH
ANVQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASMA
SSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQVK
RQGNGLSTLEVK
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcgccatccgcctgaaaaacctcgcctccctggccggcccgttcgagatc
gactttaccgccgagcccctggccagcgccgggctgttcgccatcaccgggccaaccggc
gccggtaaaagtaccctgctcgatgccctgtgcctggcgctgttcggcgcggtgccgcgc
ctgggcgataccggccaggccaagatgcccgacgctgataccgatatctccatcggtgac
ccacgtaccctgatccgtcgcggcaccggcggcggttatgccgaggtggacttcgtcggc
gtcaacggccgtcgctaccgcgcgcgctgggaagccaaccgcgcacgtgacaaagccagc
ggcaagctgcaaaacagccggcaaagcctgatcgacctggacagcgaccaactgctggcc
agccagaaaaccgaatacaagacccagctggaactggccctgggcctgaatttcgagcaa
ttcacccgcgcggtgttgctggcgcaaagcgagttcagtgcgttcctcaaggccaacgac
aacgagcgcagcgaactgctggaaaaactcaccgacaccgcgctctacacccagttgggc
cgtcgggccttcgacaaggccaaggacgccaaggacgcgcacaagcagctgcaagaccag
gccactggcgtggtgcccctggcgcctgaagcccgcgccgaactcgaccagcaactggcc
gacgcgcagcaacagctcaaaacccaacaaaaccagctcaaacagctggaattgcaacac
acctggctcaaggaactgcgcgaatggcaggagcgccagcgcagtgccaccgagcagctc
cagcgtgcgcaagcggagtgggacaaccaggccacgcagcgccaggacctgagccgcctc
gaccaactggcaccgcaacgccatcagtttgcgcgcagggcagaactcctcaccttgctg
acgccgctggccgcgcagattcaggcgcacatcgagcaacaggccgagttgcatacccgc
caggcccaggcccaacaacagcaggcatcggcccaggcggcactggccgaagccctcaag
gcccagggcgacgccgtgccgttgctgcgccaggcctttgaagcacaaagcaccctcgcc
cacttgaccagagacctggccaagcgcaccgaggacaaacagcaacacgaaaccgcctgc
accgaaggccaggcgctgctcaagggcttgcaggacaagcacgcccacgttgccgagcgc
ttgcaacgcctggccgccgaacttgaacgcagcagcgccctcgccccgctcagcgaggcc
tggggcgcctaccgcgaccgcctgcaacaactgatgctgatcggtaatcgcctgaagaaa
ggccagtccgaactgccgcaactggaacagcgcgccacgaccgccgcggaaaagttcgcc
caacaacgtgacgcgctcgacctgctgtaccaagaagccggtgccgagccgcacgccgtg
gccgagcagatccaattgctggccagcctgctgcaagacaatcgcaagcagcaacgcgcc
ttcgaagacctgactcgcctgtgggacagccaacaacagctggaccagcaagccgcagcc
ctgaggcaaaaactcgcagacgcccagcagcagcgcgaacaactgaaccagaccggcctg
caaaccaaggccgaactggccgtcgccgaacaaaccctgacggtgaccaagcaactgctg
gaacgccagcgcctggcgcgcagtgccagcgtcgaggaattgcgcgagcaattgcaggac
ggccagccctgcccggtgtgcggcagccatgagcatccgtatcaccagcccgaggccctg
ctgcaaagcctgggtcgccatgatgaaagcgaagaggccacggcgcagaaagccgtcgac
accctcaaggaaaaactcaccgagctacgtggcgaagtgggcggcctgatcgcccagcaa
aaagaattcctgcaacaacaggaacacctggcaacccaacagcacgcgctccagcccagc
ctggacgcgcacccactggcggcctcgctgttcaatcaggacgaagccaaacgcagccat
tggttggcccagcaactcagccaactgacccaaagcatcacccaggacgaacaacgccag
ggcgccctgctcaacctgcagcaaaacgccgggcgcttgcagcaacaactgcaagccgcc
caggacgcgagccagcaggcgcgccaattgctggtcgaccagcagcgcgagctgtccaac
gaccgcgagcgcctcgacgaagaactcaacgccttcgccagcctgctgcccgccgacacc
ctggaaggcttgcgcagcgacccggccgcgaccttcatgcaattggaccagcaggtcagc
cagcgccttgagcagcttggccatcaacatgacgagctggccgagcagcaggaacgccag
caggccatcgagaaagaacacacgcaccagcagcatcgccaacagcagctcgacgtcttg
catcagcaggtcaccgagttgagcgagcaacagcaggccgcccaggccacgctcaccgcg
ctgctgggcgagcacaccagcgccgaacactggcagcagcagttggaacaggtggtggtg
cagtcacgccagagcgaggccgacgccaaccagcagttgcaggacatccgcaaccaactg
atccaactggccgccgacctcaaggcccagcaggagcgccagcaatccttcgaagccgaa
cagcacaccctcgatgcccgcaccaacgaatggcgcgccctgcaccccgaactggatgac
cacggcctcgcccgcctgctggcgttcgacgacaagcaggtcagcgaactgcgccagcag
gtgcaacacagcgaaaaagccgtcgaacaagccaaggttttgctgcaagagcgcgagcaa
cgcctggccgaacacctggccttgcacaacggcaacctggaagccgaagcgctcgacagc
gccctggccgccctcaaccagcaattggccgagggcgaaaaacagtgcgccgagttgcgt
gcgcgccaagccgacgaccaacgtcgccaggacgccaaccacgccctggccgagcaaatc
gccagagcctatgacgagtggcaacgctgggcgcgcctgaatgcgctgatcggctcggcc
accggtgacacgttccgcaagatcgcccaggcctataacctcgacttgctcgtgcaccat
gccaacgtgcaattgcgccagctggtgcgccgctaccgcctcaagcgcggtggcagcatg
ctcgggctactggtgatggacaccgaaatgggcgacgaactgcgctcggtgcattcgctg
tccggcggcgagacatttctggtgtcgctggcactggcattgggcctggcgtcgatggcg
tcgagtacgttgaagatcgaatcgctgtttatcgacgaaggcttcggcagcctcgaccct
gagtcgctgcaactggcgatggacgccctggacggcttgcaggcccagggccgcaaggtg
gcggtgatctcccacgtgcaggaaatgcacgaacgcatcccggtgcagatccaggtcaag
cgacagggcaacggcctgagcaccctggaggtcaagtga
DBGET
integrated database retrieval system
