Pseudomonas gorinensis: U771_18930
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Entry
U771_18930 CDS
T02969
Name
(GenBank) type VI secretion protein
KO
K11900
type VI secretion system protein ImpC
Organism
psk
Pseudomonas gorinensis
Pathway
psk02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
U771_18930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psk02044
]
U771_18930
Secretion system [BR:
psk02044
]
Type VI secretion system
Imp/Vas secretion system core components
U771_18930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
AHC36304
LinkDB
All DBs
Position
complement(4167827..4169302)
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AA seq
491 aa
AA seq
DB search
MSAQHKPLATSTDDNGGILDNIIAQTLLTVDDEAYGIAKRGVSAFIEELVKPHNSGEPVK
KRLVDRMIAEIDAKLSQQMDEILHHPDFQALEAAWKGLQLLVDRTNFRENIKIELLNVAR
QDLLDDFEDSPEINQSGLYKHIYSAEYGQFGGQPVGAIIANYFLSPSAPDVKLMQYVSSV
ACMAHAPFIAAAGPGFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDARYIGLTVP
RFLLRTPYDPSECPVKTFAYQENVVNSHEHYLWGNTAYAFATRLTDSFARFRWCPNIIGP
QSGGMVEDLPLHHFHSMGEIETKIPTEVLVSDRREYELAEEGFIALTMRKGSDNAAFFSA
SSVQKPKYFGTSAEGREAELNYRLGTQLPYMMVVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAARIVVSDVDGEPGWYRVNLSVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcacaacataaaccgctggccacatcaacggatgacaacggcggcatccttgac
aacattattgcccagacgctgctgacggttgacgacgaggcgtatggcatcgccaagcgc
ggggtctcggcgtttatcgaagagctggtcaaaccgcacaacagcggtgagccggtcaag
aaacgcctggtcgatcggatgatcgccgaaatcgatgccaagctcagccagcagatggac
gaaattctccaccacccggatttccaggcgcttgaagccgcgtggaagggcctgcagttg
ctggtcgatcgcactaattttcgcgagaacatcaagatcgaactgctgaatgtcgcgcgg
caggacctgttggatgattttgaagactcgccggaaatcaaccagtccgggctctataaa
cacatctacagtgccgaatacggtcagtttggcggccagccggtaggcgccatcattgcc
aactacttcctctcgcccagcgcgccggatgtcaagctgatgcagtacgtttccagcgtg
gcctgcatggcccatgcgccgtttatcgcggctgccgggccggggttctttggcttggaa
agctttaccgggctgcccgacctgaaggatctcaaggatcatttcgaaggcccccagttt
gccaagtggcagagctttcgccagagcgaagatgcccgctacatcggccttaccgtgcca
cggttcctgctgcgcaccccctacgacccgtcggagtgcccggtcaagacctttgcctac
caggaaaacgtggtcaacagccacgaacactatctgtggggcaatactgcctacgcgttc
gccacgcgcctgaccgatagcttcgcccggtttcgctggtgcccgaacattatcggtccg
caaagcggtggcatggtggaggacctgccgttgcaccacttccacagcatgggcgaaatc
gaaaccaagattcctaccgaggtgctggtttccgatcgtcgcgaatatgagttggccgag
gaaggctttattgccctgaccatgcgcaagggcagtgacaatgccgcgttcttctccgcc
agttccgtgcagaaacccaagtacttcggcaccagcgccgagggcagggaggccgagctg
aactaccgcctgggtacccagttgccgtacatgatggtggtcaaccggttggcccattac
ctcaaggtgctgcagcgcgaacaactgggttcgtggaaggagcgcaccgaccttgagctg
gagctcaacaagtggattcgccaatacgtggcggaccaggaaaaccccagcgccgaagtg
cgcggccggcgtccgctgcgagccgcccgtattgtcgtcagtgacgtcgacggggaacct
ggctggtaccgcgtcaacctcagtgtgcgacctcacttcaagtacatgggggcggatttc
accttgtccctggtcggcaagctcgacaaagaatga
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