Pseudomonas gorinensis: U771_26875
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Entry
U771_26875 CDS
T02969
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
psk
Pseudomonas gorinensis
Pathway
psk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
U771_26875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psk03400
]
U771_26875
Enzymes [BR:
psk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
U771_26875
DNA repair and recombination proteins [BR:
psk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U771_26875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
SH3_13
Helicase_RecD
Viral_helicase1
AAA_22
UvrD-helicase
AAA_16
SLFN-g3_helicase
AAA_17
AAA_28
T2SSE
NACHT
NTPase_1
PhoH
TraI_hel_assoc_N
AAA_5
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AHC37853
LinkDB
All DBs
Position
complement(5885999..5888068)
Genome browser
AA seq
689 aa
AA seq
DB search
MSLSSLPLEALAPLNRAADLVQLLERWVDRGWLRALDKAFVGFLYELDPHADPLVLLAAA
LTSHQLGHGHVCLDLFETLKAPDFALSLPPEGDLQAGAMLLPSQLLDGLDGADWCHTLAA
SPLVALAVDGSEAAQSRPLVLSGKRLYLRRYWAYERRIDTALRLRLATAETVAADLPQRL
NGLFDQPVPEGMIDWQKLACALATRGAFSIVTGGPGTGKTTTVVRLLALLQAPAVESGTP
LRIRLAAPTGKAAARLTESISQQVLSLKVPDSVREKIPTQVTTVHRLLGSRPGTRHFRHH
QGNPLPLDVLVVDEASMIDLEMMANLLDALPPHARLVLLGDKDQLASVEAGAVLGDLCRD
AEAGWYSPETRQWLQAVSGEDLSASGLQEDLDGDHPLAQQVVMLRYSRRFGEGSGIGQLA
RWVNQQNAEEARQLLAARSHSDLFCVSLKGEHDHALERLVLDGQGDGAEGYRYYLNLLQS
ARPSFDTPREDHAWTHWAQQLLQAFDAFQLLCAVRKGPWGVEGLNLRITAALRKVRLIEG
DEQWYEGRPVLMTRNDYGLGLMNGDIGIALKLPESDGGPQVLRVAFPRNDGQGGVRFVLP
SRLNDVETVYAMTVHKSQGSEFTHTALILPEALNPVLTKELIYTGITRAKRWFSLIEPRG
GVFEEAVRRKVKRLSGLMLELGHEAEKTD
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtcgtcgttaccgctggaggccttggcccccctcaaccgcgccgctgacttg
gtgcaactgctggagcgttgggttgaccgcggctggctgcgtgcgttggacaaagccttt
gtcggtttcctgtacgagctcgacccgcacgccgatcccctggtgttgctggcggcggcg
ctgaccagccaccaactgggccatggtcacgtgtgcctggacctgttcgaaaccctcaag
gcaccggacttcgccctgtcattgccgcccgaaggcgacctgcaagccggcgccatgttg
ctgccttcgcaactgctcgacggcctggacggtgccgattggtgccataccctggccgcg
agtccactggtcgccctcgcggtggatggcagcgaggcagcacagagtcgtccgttggtg
ctgtccggcaagcgcctgtacctgcggcgctactgggcctacgagcggcgcatcgatacg
gccctgcgcctgcgtctggcgaccgcagaaaccgttgccgccgatttgccccagcgcttg
aatggcctgttcgaccaacccgtgccggaaggtatgatcgactggcaaaagcttgcctgc
gccctggccacccgtggtgcattcagcatcgttaccggtggccccggcactggcaagacc
accaccgtggtgcgtctgctggccttgttgcaggcgccggccgtggaaagcggcacgccc
ctgcgcattcgcttggctgcgcctaccggcaaggcggccgcacgtttgaccgaatcgatc
agccaacaagtgctgtcactgaaagtgcctgacagcgtgcgggaaaaaatcccgacccag
gtcaccacggttcaccgcttgctcggcagtcgaccgggcacgcggcatttccgtcatcac
cagggcaacccgctgccgcttgatgtattggtggtggacgaggcctcgatgatcgacctg
gaaatgatggccaacctgctcgacgcattgccgccccatgcgcgcctggtgttgttgggc
gacaaggaccagctcgcctcggtggaggccggcgccgtcctcggtgacctgtgccgcgac
gccgaggctggctggtacagcccagaaacccgccaatggctgcaagccgtcagcggcgag
gacctcagcgccagtggcctgcaggaagacctcgatggcgaccatcccctggcccagcaa
gtggtgatgctgcgttactcgcgacgctttggcgaaggcagcggtattggccaactggcg
cgctgggtcaaccagcaaaacgccgaagaggcccgccagctgttggccgcccgcagccac
agcgacctgttctgcgtcagcctcaaaggtgagcacgaccacgctctggagcggctggtg
ctggacgggcagggcgatggcgccgaaggctatcgctattatctgaacctgctgcaatcg
gcgcgcccgtccttcgacaccccgcgggaagatcacgcctggacccactgggcgcagcaa
ctgctgcaagccttcgacgccttccagttgctatgtgccgtgcgtaaaggcccctgggga
gtggaggggctgaacctgcgcatcaccgccgccttgcgcaaagtgcggctgatcgaaggt
gacgagcaatggtacgaaggccgcccggtactgatgacccgtaatgactatggcctgggc
ctgatgaacggcgatattggcattgccctgaaactgcccgaaagcgacggtggccctcag
gtactgcgtgtcgccttcccacggaacgatggccagggcggtgtgcgttttgtactaccc
agccgcctgaacgatgtggaaaccgtgtatgccatgaccgtgcacaaatcccagggctct
gaattcactcacaccgccttgatcctgcccgaggcactcaacccggtgctcaccaaagag
ctgatctacaccggcatcacccgcgccaagcgttggttcagcttgatcgaaccccgcggc
ggcgtgtttgaggaagccgtgcgacgcaaggtcaagcgcttgagtgggttgatgctggaa
ctggggcacgaggctgaaaaaactgactga
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